Endozoicomonas sp. GU-1: O2T12_09195
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Entry
O2T12_09195 CDS
T08918
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
eng
Endozoicomonas sp. GU-1
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eng03021
]
O2T12_09195 (rapA)
Transcription machinery [BR:
eng03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
O2T12_09195 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Na_Ca_ex_C
Motif
Other DBs
NCBI-ProteinID:
WBA83271
LinkDB
All DBs
Position
complement(2135276..2138152)
Genome browser
AA seq
958 aa
AA seq
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MTSFVSGQRWISDTETEQGLGTVLTFDSRMVTLLFPATGETRLYSINNCPLTRVEFNPGD
RVESHEGWIMLVTEVIEKDGLLTYCGTLPDGETRQLPEAELGNHIRFNKPQDRMLAGQID
QNSNFTLRYKTLQYNYGLRKSPMRGLIGPRTSLIPHQLHIAREVSQRHAPRVMLADEVGM
GKTIEAGLILHQQLITGRASRVLILLPESLVHQWLVEMLRRFNLRFSVFDEERCRQSPDE
NPFNTEQLIISSIGFLCHDDERRKQALEADFDLLIVDEAHHLIWSEEETNAEYRCVEALS
LQIPGLLLLTATPEQMGAKSHFAHLRLLDPDRFHDLAAFAAEESRYEPVAEAVQELLNND
NQKLPAKARDHLISFLGKDSKSLIDILDQGDEEARNTARTQLLRRLLDRHGTGRVMFRNT
RAAVGGFSGRAAQGYPQVLPELYEIALEEESNYRHNLYPELAYQAQIRVDDMDPWWKVDP
RVDWLINLLKLLKKEKVLVICANANTALDLENALRILSGIPAAVFHENMSIIERDRAAAF
FAEGEHGAQVLVCSEIGSEGRNFQFAHHLVLFDLPEHPDLLEQRIGRLDRIGQTEAIKIH
VPYLSGTGQEALFHWYQLGLNAFADTCPAGSMVQMQLGEALLPYLQPGSQASTEAMDTLL
NQAAQLNRQQMEHLHKGRDRLLELNSRGLISNEDMINDIEEQEQPRQLKRFMEKLFEGFG
VEAEDYSKHCLVIRPGSHMITTFPGLPDDGMTVTFDRDMALSREDMHFLTWEHPIVAEGM
DMVLTSELGNTSVALLKNKALKPGTMLLEAIYVVETSADRTLQLDRYLPATPIRCLIDPG
FNDLSEKVAFDTLNAQLQPLKRGVAKKLVNAQRAPFLAMLDKAEGYAKDRVQPIVNQACQ
NLLTDVTEEIKRLAALKVVNPNVRGEEIEYLKNRAALGHQALQKAVLRLDALRIMIAG
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtttcgtttctgggcaacgctggattagtgatactgagaccgaacaggggctg
ggcactgtgctcacctttgacagtcgaatggtcaccctgctgtttcctgccaccggggaa
acccggctttactcaataaacaactgccctctgacccgcgttgagttcaaccccggagat
cgtgtcgaaagccacgagggctggattatgctggtcaccgaggtgattgagaaagatggc
ctgctgacctactgcggaaccctccctgacggagaaacacgacagctgccagaagccgag
ctgggcaaccatattcgcttcaacaagccacaggaccggatgctggcgggtcagattgac
cagaacagcaactttaccctgcgttacaagacactccagtataactacggtctgcgcaag
tccccgatgcgtggcctgattggcccacgcaccagcctgattccccaccagctgcatatt
gcccgggaggtatcccagcgtcatgcgccacgggttatgctggccgacgaagtgggcatg
ggtaaaaccattgaagccggcctgatactgcaccagcaactgattaccggccgtgccagc
cgggtgctgattctcttgccggaaagcctggtacaccagtggctggtggagatgctgcgc
cgtttcaacctgcgtttcagtgtctttgacgaagagcgctgccgccagtctccggatgaa
aacccgttcaataccgagcagctgattatcagcagcatcggctttctctgccatgatgac
gagcgccgcaaacaggcattggaagcagacttcgacctgttgattgtggatgaagcccat
caccttatctggtctgaagaggagaccaatgcggaataccgctgtgttgaagcgctgtcc
ctgcagattccgggactcctgctgctgaccgcgacgccggagcagatgggtgccaaaagc
cactttgcccatctgcgtctgctggacccggaccgtttccatgatcttgccgcctttgcc
gccgaagaaagccgttatgagccggtggcagaggcggttcaggaacttttgaacaatgac
aatcagaaactccctgccaaggcaagggaccatctgatcagtttccttggaaaagacagc
aagtcgctgattgatatccttgaccagggtgatgaagaggctcgaaacacggcccgaacc
cagctgctgcgccgcctgctggatcgtcatggtaccggccgtgtgatgtttcgtaatacc
cgggcagccgttggcggattctctggtcgagcagcccagggctacccccaggtgctgccg
gagctgtacgaaatcgccctggaagaagagtccaactaccgccataacctttatccggag
ctggcttatcaggcccagatccgtgtcgatgatatggatccctggtggaaagtcgacccc
cgggtagactggctgataaacctgctgaaactgctgaagaaagagaaagtactggttatc
tgtgccaatgccaatacggcactggacctggaaaatgccctgcgcatactgtccggcatt
ccggcagcggttttccacgaaaacatgagcattattgagcgggatcgtgctgcggccttc
tttgccgaaggagagcatggtgcccaggtactggtgtgttcagaaattggcagtgaaggc
cgtaacttccagttcgctcaccatctggtgctgtttgacctgcccgaacatcccgacctg
ctggaacaacgtattggccgactggatcgtattggccagactgaagccatcaagattcac
gtgccctatctctctggtaccggtcaggaggcactgttccactggtaccagctgggattg
aacgcctttgccgatacctgccctgccggtagcatggtgcagatgcaactgggtgaagcg
ctgttgccttatctgcaaccgggcagccaggcctccacagaagccatggataccctgctc
aaccaggcagcccaattgaaccggcaacagatggagcaccttcataaaggcagagaccga
ctgctggagctgaactcccggggcctgatctccaatgaagatatgatcaacgacatcgaa
gagcaggaacagccaagacagctcaagcggtttatggagaagttgttcgaaggctttggt
gttgaggcggaagactattccaaacactgtctggtgattcgcccgggcagccacatgatc
accaccttccccggcctgccggatgatggcatgaccgtcacctttgaccgggacatggca
ctgtccagagaagacatgcacttcctgacctgggagcatcccatcgttgccgaaggcatg
gatatggtgctgaccagcgagctggggaatacctctgtggctttgctcaaaaacaaagcc
ctgaagcccggcaccatgctgctggaagcgatttacgtggtagaaaccagcgccgaccga
actctgcagctggaccgctacctgccagccaccccgattcgctgtctgatcgacccgggg
ttcaatgacctgtccgaaaaagtggcgtttgataccctgaacgcccagcttcagcctttg
aaacggggtgttgccaaaaaactggtgaatgcccagcgggccccctttctggccatgctg
gataaagccgaagggtatgccaaagatcgggtacaacccattgttaatcaggcctgccag
aacctgctgaccgatgtcactgaagagatcaaacgactggcggcgcttaaagtcgttaac
ccgaacgtccgtggtgaagagattgaatatctgaaaaaccgcgcagccctggggcatcag
gcactgcagaaagcggttcttcgactggatgcgctacgaatcatgattgccggttaa
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