Endozoicomonas sp. GU-1: O2T12_11370
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Entry
O2T12_11370 CDS
T08918
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O2T12_11370 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_11370 (uvrB)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O2T12_11370 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O2T12_11370 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_5
DUF87
AAA_22
AAA_30
Kinesin
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
WBA83668
LinkDB
All DBs
Position
2711675..2713687
Genome browser
AA seq
670 aa
AA seq
DB search
MSRSFKVSSRFGPAGDQPVAIEQLVKGIDAGLACQTLLGVTGSGKTFTVANVIEKIQRPT
IIMAHNKTLAAQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPTSDTYIEKDASVNEHIE
QMRLSATKALMERQDAIIVATVSAIYGLGDPQSYLKMMMHLDRGDRVDQRTILRRLAELQ
YTRNDADFRRATYRVRGDVIDIFPAESEKEAVRLELFDDELEAISEFDPLTGEVLRKLPR
ATIYPKTHYVTPRQTILDAVEAIKVELVDRLNVLRDNNKLVEAQRLEQRTQFDLEMMIEL
GYCTGIENYSRYLSGNKPGEAPPTLFDYIPDNALLVIDESHVTVPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWEGRRPQTIFVSATPGKYEEENQGQVVDQVVRPTGLVDP
EIEVRPASSQVDDLLMEIHKTVAKEERVLVTVLTKRMAEDLTEFLHEQGVRVRYLHSDID
TVERVEIIRDLRIGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGR
AARNIHGRAILYGDRITGSMERAISETGRRRKKQMAYNKKHNITPKGVVKSVADILEGAV
VPGRKKGSKAQKAVAEPATEYQVPMTPDVMAATIKKLEAKMMEHSRNLEFEQAAAVRDEI
VLLREQVLKH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgatcgtttaaagtttcttcccgcttcggtcctgccggtgatcaaccggttgct
attgaacagctggtcaagggtattgatgctggccttgcctgccagacattgctgggggta
acaggctccggcaagaccttcacggtggccaatgtgatcgaaaaaatacagcggccgacg
atcatcatggcccacaacaagacactggccgcacaactctacggtgagttcaaggagttc
tttccagacaatgccgtggagtattttgtctcctactatgactattaccagccagaagcc
tacgtacccacgtcagatacctatatcgagaaagatgcatcggttaatgagcatattgaa
caaatgcgtctctctgccaccaaggccctgatggaacgacaggatgcgattattgtggca
actgtctccgccatttatggtctgggtgatccacagtcctatctgaaaatgatgatgcat
ctggaccgtggtgacagggtggatcagcgaaccattctgcgtcgcctggcggaattgcag
tacacgcgcaacgatgcggattttcgccgggccacttaccgtgttcgtggtgatgttatt
gatatttttcccgctgaatcggaaaaagaggcggtccgtttggagctgtttgacgatgag
ctggaagccatcagcgagtttgatccgttgactggcgaggttctgagaaaattgcccagg
gcgaccatttatccaaaaactcactatgtgacccccagacagaccatcctggatgcagtg
gaagccattaaggtagagctagtggataggctcaatgtcttgcgcgataacaacaagctg
gtggaagctcagcgacttgaacagcgcacgcagtttgatctggaaatgatgattgagctg
ggttactgcaccggcattgagaactattcccgctatctctccggtaataaacccggtgag
gcaccgccaaccctgtttgattatattccggacaatgcattgctggtgattgatgaatcc
catgtgactgtgccgcagatcggtgccatgtataaaggggatcgctctcgaaaagagaca
ctggtggagtacggtttccgcctgccttctgccctggataaccgcccaatgaaatttgaa
gagtgggaaggacgacggccgcagactatttttgtctctgcgacaccgggtaagtatgag
gaagagaaccaggggcaggtggttgatcaggtggtcaggcctaccggtctggtggatccg
gaaattgaggtccgaccggcttcttcccaggtggatgatctgctgatggaaattcataaa
accgttgccaaagaggagcgggtgctggtcacggtgcttaccaaacgaatggctgaggac
ttaaccgagtttttgcatgagcagggtgtccgggtacgctatctgcattcagatattgat
acggtggaacgggtggagattatccgtgacttgcgtattggtgcctttgatgtgctggtg
gggatcaacctgctgcgggaaggccttgatatgcccgaggtctctctggtcgctattctg
gacgccgataaggaaggctttctgcgttctgaccgttcattgattcagaccattggccgt
gccgcccgcaacattcatggccgggccattctctatggtgaccggattactggctccatg
gagcgggcaatcagcgagaccgggcggcgtcgcaaaaagcagatggcctacaacaagaaa
cacaatattacgccaaaaggtgtggtcaaatctgtagctgatattcttgaaggggctgtt
gtgcccggacggaagaaaggcagtaaagcccagaaggcagtggcagagccggcaactgag
tatcaggttcccatgactccggacgtcatggccgcgactatcaagaagctggaagcaaaa
atgatggagcactcccgtaacctggagtttgaacaggctgctgctgtcagggatgaaatt
gtcttgctcagagagcaggttttaaaacactga
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