Endozoicomonas sp. GU-1: O2T12_11635
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Entry
O2T12_11635 CDS
T08918
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
eng
Endozoicomonas sp. GU-1
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eng03032
]
O2T12_11635 (hupB)
03036 Chromosome and associated proteins [BR:
eng03036
]
O2T12_11635 (hupB)
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_11635 (hupB)
DNA replication proteins [BR:
eng03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
O2T12_11635 (hupB)
Chromosome and associated proteins [BR:
eng03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
O2T12_11635 (hupB)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
O2T12_11635 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
UFL1_C
Motif
Other DBs
NCBI-ProteinID:
WBA83710
LinkDB
All DBs
Position
2772024..2772296
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADISKAAAGRALDAVISSVTGALKNGEQVVLVGFGTFSVKERAARTG
RNPQTGEPIEIAAARIPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtccgagcttattgatgctatcgctgcatctgcagacatttctaaggctgcc
gctggtcgagccctggacgccgtgattagctctgtcactggtgcactgaaaaatggtgag
caggttgttctggtaggttttggcacattttctgtaaaagagcgtgccgctcgtaccggc
cgtaacccgcagactggtgagccgattgaaatcgccgctgccagaattccaagcttcaag
gctggtaaggctcttaaggatgccgtgaactga
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