Endozoicomonas sp. GU-1: O2T12_15890
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Entry
O2T12_15890 CDS
T08918
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O2T12_15890 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eng03019
]
O2T12_15890 (recQ)
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_15890 (recQ)
Enzymes [BR:
eng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O2T12_15890 (recQ)
Messenger RNA biogenesis [BR:
eng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O2T12_15890 (recQ)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O2T12_15890 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
WBA79842
LinkDB
All DBs
Position
3806408..3808618
Genome browser
AA seq
736 aa
AA seq
DB search
MSAPALEILNSVFGYDAFRSHQSAIIDNILARNDTLAIMPTGGGKSICYQIPALIFPGLT
LVISPLISLMEDQVHQLTSLGIPAALLNSTLSSADYHNTLGQVQNGSIKLLYMAPETLML
ERTQQLLSTLNIDCLTIDEAHCISEWGHDFRPEYRQLAEVRRHFPNAVCVALTATATPRV
QQDIKTSLQMSDSNEFIASFNRTNLFLEVMEKKKPVDQTLQLIEKYQNQSGIIYCNSRKQ
VDELTQILADNGCSVAPYHAGLASEVRKANQSAFIRDDIQIMVATVAFGMGINKSNVRFV
LHFDMPQNIESYYQQIGRAGRDGLPANCHFLFSYGDIQKVKFFINQKPDSEQRIANQHLN
ALIGYAESEECRRAPLLHYFGETYSQKNCQLCDNCLSEKQPFTDVTVAAQKLLSCIYRTG
QLFGISYVIDVLRGSKSKRIRERQHDQIPTYGIGTELTRPQWQQLARKLIQENLVLQDAE
YGSLKLTDNARAVLKGAQQIQLRLTQRAEPASKAATEKQGSPEYNHELFDILRACRKVLA
DQENVPPYIIFSDKTLIEMSARFPQSRDSLLQVSGVGQVKLDHYGDAFLHEIRSFCEKHQ
IEEIAQPSASNSRPRYRTTSRGRHVEVGESFSQHNCLNRLQEEFNLKLSTLLSHLYKYQT
EVAHLPVSDAFLQQSRLLPAQQDRVLEAINTHGTDRLRPLFDAMQEQVSYDELHLLRLHY
LVQHPQSLTDKTDDNR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccagcactagaaatactcaattccgtctttggatacgatgcatttcgttca
caccagagcgccattattgacaacatactggctcgtaacgacacgctggccatcatgccc
accggtggtggaaagtccatctgttaccagatcccggcgctgatctttccgggcctgacc
ctggtgatctcgccgctgatctccctgatggaagatcaggttcatcaactgacgtctctg
ggcatccctgccgccctgttaaacagcaccctgagcagtgcggattatcataacaccctg
ggccaggtgcagaatggcagtatcaagctgctgtatatggcaccggaaaccctgatgctg
gaacgcacgcaacagttgctaagcaccctcaacatcgactgtctgaccattgatgaagcc
cactgcatctccgaatggggccatgatttccgtccggaataccggcaactggcggaggtg
cgccgacactttccaaatgccgtctgtgtggcactgaccgccaccgccacaccaagggtt
cagcaggatataaaaaccagcctgcagatgtccgacagcaatgagtttatcgccagcttt
aaccggaccaacctgtttctggaggtgatggagaaaaagaagccggttgaccagaccctg
caactgattgagaaataccagaaccaatccggcattatctactgcaattccagaaaacag
gtggatgaactgacgcagattctggcggataacggttgttccgtagcgccctatcatgcc
gggcttgccagtgaagtacgcaaggccaaccagtccgcttttatccgtgatgatattcag
atcatggtggccaccgtggcgtttggtatgggcatcaataaatctaacgttcgttttgtc
ctccacttcgatatgccccagaatattgaaagctactatcagcagatcggccgtgccggg
cgggacggactgcctgccaactgccacttcctgttcagctatggcgatattcagaaggtc
aagttctttatcaaccagaaacccgattcggaacagcgcatcgccaaccagcacctgaac
gccctgatcggctatgccgaatccgaagagtgccgcagagcaccgctgctgcactacttc
ggtgaaacctatagccagaaaaactgccagctctgcgacaactgcttatccgaaaaacaa
ccgtttaccgatgtgaccgtagccgcccagaaactgctctcctgcatctatcgcacagga
cagctctttggtatttcctatgtgattgatgtgctgcggggttcaaaatcgaaaagaatc
cgggagcgccaacatgaccagattcccacctacggcatcggtactgaattgaccagaccc
cagtggcagcagctggcccgtaaattgatacaggaaaacctggtacttcaggatgcggaa
tacggcagcttaaaactgaccgacaatgcccgcgctgtgctcaaaggggctcagcaaatc
cagctcaggctcacccaaagagcagaacccgccagtaaagcagcaacagaaaaacagggc
agcccggaatataaccacgagctgtttgatattctcagggcctgtcgcaaggtactggca
gatcaggagaacgtgccgccgtacattattttttccgataaaaccctgattgagatgtcg
gccagatttccacaatccagggacagcctgttacaggtcagcggtgttggccaggtaaaa
ctggatcactatggcgatgcgtttctccatgaaatccggtcattctgcgaaaaacatcag
atagaagagattgcacaaccttctgccagtaacagccgcccccgttatcgaacaacaagc
cggggcagacatgttgaggttggggagtcgttcagtcagcataactgtctcaaccgtctt
caggaggagtttaatctgaagctgtctaccctgctcagccatctctataaataccagacg
gaagtcgctcatctaccggtctcggatgcttttctccaacagtcccggctattgcctgca
caacaggatcgtgttctggaagccataaacacccatggtactgatcgtttacgcccactg
tttgatgcgatgcaggaacaagtttcttatgatgaattgcatctgttaaggctgcactat
ctggttcaacatccgcaatcactcacggacaaaaccgacgacaatagataa
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