Endozoicomonas sp. GU-1: O2T12_20255
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Entry
O2T12_20255 CDS
T08918
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O2T12_20255 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_20255 (uvrA)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O2T12_20255 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O2T12_20255 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_21
Viral_helicase1
nSTAND3
AAA_25
ScfRs
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
WBA80631
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All DBs
Position
4874878..4877703
Genome browser
AA seq
941 aa
AA seq
DB search
MEKITVQGARTHNLKNINLEMPRDSLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGIPHC
PTHHLHLEAQTVSQMVDQVLALPEGTKLMLLAPVVRGRKGEHLHVFNELRSNGFIRARIN
GIVTDLDTPPKLDKKKKHTIEVVIDRFKVRDDLQLRLSESFETALELTDGLATVSYMDDD
AKDDIVFSSRFACPECGYSLNELEPRLFSFNNPAGACATCDGLGVKQFFDQDRIVQHPEL
TLAEGAIRGWDRRSVYYFHLLKSLAAHYGFSIDTPFDDLSPEQQNIILHGSGDEEVNFSY
VNDRGDVYKKRHIFEGIIPNFERRFRDTDSQSVREELAKYLSTQPCPSCKGTRLRKEARN
VFIQDETLPDLVKLPVEKALVYFQDLDLPGRRGEIARKVLKEICDRLSFLVNVGLNYLTL
ERSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLNTLTRLRDLGNT
VIVVEHDEDAIRSADHVIDIGPGAGVHGGAIVAQGTPGQIMDSPDSLTGQYLSGIRKIHV
PSNRTPADPKKTLKLSGCSGNNLKHVTLEIPVGLMTCVTGVSGSGKSTLINGTLYPLAAT
ALNKATTLTAAPYKKLTGIQHFDKCIDIDQSPIGRTPRSNPATYTGIFTAIRELFAGTQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVACDVCKGKRYNRETLEVKY
KGKNIHEVLEMTVEEALQYFDPIPAIKRKLQTLMDVGLSYIHLGQNATTLSGGEAQRVKL
AKELSKRDTGKTLYILDEPTTGLHFHDIEQLLTVLHRLRDHGNSVVVIEHNLDVIKTADW
IIDLGPEGGDGGGQIIAAGTPEAVSDVPESHTGRFLKPMLA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagattaccgtacagggcgcgcgtacacacaatctgaaaaacatcaacctggag
atgccccgtgacagcctgatagtaatcaccggcctatcgggttccggtaaatcttccctg
gcctttgacacgctgtatgcagaaggtcagcgtcgttatgttgagtccctgtcagcctat
gcccgccagtttctatccatgatggaaaagcccgatgtagaccatatcgaaggactctca
ccggccatctccattgagcagaaatccaccagccataacccgcgctccaccgtcggtacg
atcacagaaatctatgactatctccggttgctgtttgcccgcgtcggcattccacactgc
ccgacacaccacctgcatctggaagctcaaaccgtcagtcagatggtagaccaggttctg
gcactgcctgaaggcaccaaactgatgctgctggccccggtagtcagggggcgcaaaggt
gaacacctccatgtattcaacgaactgagaagcaacggttttatccgtgccagaatcaac
gggattgttacggatcttgatacaccaccaaagctggataaaaagaagaagcacaccatc
gaagtggtcatagaccgcttcaaggtgcgtgatgatttacaactgcgcctctccgagtcg
tttgaaacggcccttgagttgaccgatggtcttgccactgtcagctacatggatgatgac
gctaaagacgacattgtcttttcttcccggttcgcctgcccggaatgtggttacagcctc
aatgagctggaaccacggcttttttcctttaacaatccggccggagcatgcgccacttgt
gatgggctgggcgttaaacagttcttcgaccaggatcgtatagtacagcaccctgaattg
accttggcagaaggcgcaatccgtggctgggaccggcgcagcgtttactactttcacctg
ctgaaatcactggccgctcactacggtttcagcattgacaccccgtttgatgacttaagc
ccggaacagcagaatattattcttcatgggtccggtgatgaagaggtcaatttcagttac
gtcaatgaccggggagatgtctataaaaaacggcatatttttgaaggcattattcccaac
tttgagcgacgtttcagggacaccgactcccagtccgtccgggaagagctggccaagtac
ctcagcacccagccatgcccatcctgtaaaggtacccgtttacgcaaagaagcccggaat
gtatttatccaggatgaaaccctgccggacctggttaaattgcccgttgaaaaagcactg
gtctattttcaggatcttgacctgcccggccgccgtggcgagattgccagaaaagtactt
aaggaaatctgtgatcgcctgagctttctggtcaatgtcggcctgaactatcttaccctg
gagcgcagtgcggataccctttccggtggtgaggcccagagaatacgactggccagccag
attggtgcaggtcttgtgggggttatgtatattcttgatgaacccagtatcgggctgcat
caacgggacaatgaacgtcttctgaatacgctgacccgtttgcgagacctgggtaatacg
gtgatcgtcgtggaacatgatgaagatgccattcgcagcgctgatcatgttatcgatatt
ggccccggagccggtgttcatggtggtgccatcgtcgcccagggaacccccggacagatc
atggactcgccggattctttaacaggtcaatacctctcaggtattcgcaagatccatgtg
ccatccaacagaacacccgcagaccccaagaaaactctgaaactcagtggttgcagcggc
aataacctgaaacatgtcactctggaaattccagtgggtctaatgacctgtgtcaccggc
gtgtcgggctccggcaagtccaccttaatcaatggcacactgtatccgctggccgccaca
gcgctcaataaagcaacaacattaaccgctgctccctataaaaagctgaccggcattcag
cattttgataaatgcattgatattgaccagagtcccattggccggacaccacgctctaac
ccggccacctacaccggtatttttaccgccattcgtgaactcttcgccggcacccaggag
gctcgttcccggggctataaacccggccgattcagcttcaatgtcaagggtggccgatgc
gaggcctgccagggagacggtgttatcaaggtagagatgcactttctgccagatatctac
gttgcctgcgatgtctgtaagggtaaacgttataaccgcgaaaccctggaagtaaaatac
aaaggcaagaacatccacgaagtacttgaaatgaccgtggaagaagccctgcaatacttc
gatccaatacccgcgatcaagcgcaaactgcaaaccctgatggatgtagggctttcctat
attcatctcgggcagaacgccaccaccttgtcgggtggtgaagcccagcgggtgaaactg
gcgaaagagctgtccaaacgggataccggtaaaacactctatatactggacgagcccacc
accgggctccattttcacgacattgaacagctactcactgtccttcatcgtttgcgagat
catggcaacagcgtggtcgtcattgagcacaacctggacgtgattaaaacggcagactgg
attattgacctgggcccggagggtggtgatggcggtgggcagattattgccgctggcacc
ccggaagccgtatcggatgttccagagtctcataccggccgctttctgaaaccgatgctt
gcttga
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