Enterobacter sp. HK169: EnteroDNA1_02240
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Entry
EnteroDNA1_02240 CDS
T11374
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
enhk Enterobacter sp. HK169
Pathway
enhk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EnteroDNA1_02240 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enhk03019
]
EnteroDNA1_02240 (deaD)
03009 Ribosome biogenesis [BR:
enhk03009
]
EnteroDNA1_02240 (deaD)
Enzymes [BR:
enhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EnteroDNA1_02240 (deaD)
Messenger RNA biogenesis [BR:
enhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EnteroDNA1_02240 (deaD)
Ribosome biogenesis [BR:
enhk03009
]
Prokaryotic type
rRNA helicases
EnteroDNA1_02240 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AOL13431
LinkDB
All DBs
Position
complement(2381870..2383774)
Genome browser
AA seq
634 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRNDRGPRGDRPER
GGEDRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHST
IELPKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRPDRGGERRGGGRSFGGERREGGRS
EGRGGEGRRFSGERRENRGPRREEGTSRRRFGDA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgcagaagcaatgacggaattctcaaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtactctggacctctctaaactgagcggcctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgtcgaaaccatcatggcgcagatcccggacggt
catcagaccgcgctgttctctgccaccatgccagaagcgattcgtcgtatcactaagcgc
ttcatgaaagatcctcaggaagtgcgtattcagtccagcgtaaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgcaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgtgcgtaccaaaaacgcgactctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtttgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgtgaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgcgggtcgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccagaagctgacctgccaaacgcagatctgctgggc
aaacgccgcctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gaccagtaccgtgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcgccgatgcgtcctaagcgtgaattccgtgaccgtgacgatcgcttcgaa
cgtcgtggcgaccgtaatgaccgcaatgaccgtggcccacgtggtgaccgtccagagcgt
ggtggtgaagaccgtccacgtcgtgaacgtcgtgacgcgggtgatatggaactgtaccgc
attgaagtgggccgtgatgacggcgttgaagttcgtcacatcgttggcgcgatcgctaac
gaaggcgacatcagcagccgttacatcggtaacatcaagctgttcgcatcccactctacc
atcgagctgccaaaaggcatgccgggcgaagtgctgcagcactttacgcgtacccgcatc
ctgaacaaaccgatgaacatgcagctgatgggcgatgcacagccacgtccagaccgcggt
ggtgaacgtcgtggcggtggtcgcagcttcggtggcgagcgtcgtgaaggcggccgcagc
gaaggtcgcggtggtgaaggtcgtcgtttctccggcgagcgtcgcgaaaaccgcggccca
cgtcgtgaagaaggcaccagccgtcgccgtttcggtgacgcgtaa
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