Enterobacter sp. HK169: EnteroDNA1_03460
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Entry
EnteroDNA1_03460 CDS
T11374
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
enhk Enterobacter sp. HK169
Brite
KEGG Orthology (KO) [BR:
enhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enhk03021
]
EnteroDNA1_03460 (rapA)
Transcription machinery [BR:
enhk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
EnteroDNA1_03460 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AOL14602
LinkDB
All DBs
Position
complement(3672087..3674993)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDTRMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHDGWQLKIEDVKEENGLLAYIGTRLDTDEANVILREVLLDSKLVFSKPQDRLFAGQI
DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDIMVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFEQFVEEQNNYRPVADAVAMLL
AGKRLSDDELNTLSDLIGEQDIEPLLQAANSDSGNAESARKELIDMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKTQEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTAHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
VERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRTIYDQVHGDLIGYLATPENA
EGFDELIKSCREKHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLISFSM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRLLLDKNGTNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKAAR
ALIDAARSEADEKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttggactagga
accgtcgtagcaatcgatacgcgtatggttaccctcctcttccctgccaccggtgaaaac
cgtctgtacgctcgcaatgactcccctgttacccgcgtgatgtttaatccgggtgacacc
gtgaccagccatgacggctggcagctcaagattgaagacgtaaaagaagagaatggactg
ctcgcctacattggtactcgtcttgatacggatgaagccaatgtcatcttgcgtgaagtg
ctgctcgacagcaaactggtgttcagcaagccgcaggaccgcctgtttgccgggcaaatc
gaccgtatggatcgcttctccctgcgctatcgcgcgcgtaagttccagagtgaacagtac
cgcatgccgtggagcggcctgcgcggccagcgcaccagcctgatcccccaccagctgaac
atcgcccacgacgtaggccgtcgtcacgcgccgcgcgtgctgctggcagatgaagtgggc
ctgggtaaaaccatcgaagcgggcatgatcctccatcaacagctgctttccggcgcagcc
gaacgcgtgctgatcgtggtgccagaaaccctgcagcaccagtggctggttgagatgctg
cgccgctttaacctgcgtttctccctgttcgacgatgaacgctatgccgaagcgcagcac
gacgccgacaacccgtttgaaaccgaacagctggtcatttgttccctggacttcgtgcgc
cgcagcaagcagcgtcttgagcacctgtgcgatgccgagtgggacattatggttgttgac
gaagcgcaccacctggtctggagcgaagacgcgccgagccgcgaatacatggctatcgag
cagcttgccgaacgcgtgcctggcgtcctgctgctgaccgcaacgccggagcagctgggt
ctggaaagccacttcgcccgtctgcgcctgctcgatccaaaccgtttccacgactttgag
cagttcgtggaagaacagaataactaccgtccggtcgccgatgccgtcgccatgctgctg
gcgggcaagcgtctttctgatgacgaactcaacaccctgagcgatctgattggcgagcag
gatatcgagccgcttttgcaggctgcgaacagcgacagcggcaacgcggaatccgcgcgt
aaagagctgatcgacatgctgatggaccgccacggcaccagccgcgtgctgttccgaaac
acccgtaacggcgtcaaaggcttcccgaaacgcgagctgcatacgattaagctgccgctg
ccgacgcagtatcagacggcgattaaagtctccggcattatgggtgcgcgcaaaacccag
gaagagcgcgcccgcgacatgctttatccggaacaaatctaccaggaatttgaaggcgat
accggcacctggtggaacttcgatccgcgcgtggagtggctgatgggctacctgaccgcg
caccgctcccagaaagtgctggtgatctgcgccaaagcggccaccgcgctgcagctggag
caggttctgcgcgagcgtgaaggcattcgcgccgccgtgttccacgaaggcatgtccatc
gtcgagcgcgaccgcgccgcggcgtggttcggagaagaggacagcggcgcacaggttctg
ctgtgctcggaaatcggctctgaaggccgtaacttccagttcgccagcaacctggtgatg
ttcgatctgccgtttaacccggatctgctggagcagcgtatcggccgtctggatcgtatc
ggccaggcgcatgatattcagatccacgtgccgtatctggaaaaaaccgcgcagtccgtg
ctggtacgctggttccacgaaggtctggacgcgtttgaacatacctgcccgacgggccgc
accatttatgatcaagtgcatggcgatctgatcggctacctggccacgccggaaaacgcg
gaagggtttgatgagctgatcaagtcctgccgtgagaagcacgatgcgctgaaagcgcag
ctggagcagggccgcgaccgcctgctggagatccactccaacggcggtgaaaaagcgcag
gcgctggctgagagtattgaagaacaggatgatgacaccagcctgatcagcttctccatg
aacctgttcgatatcgtcggcatcaaccaggacgaccgcggcgagaacctgattgtcctg
actccgtccgatcacatgctggttccggatttcccgggcctgccggaagatggctgtacc
atcaccttcgagcgtgacgtggcgctgtcccgcgaagatgcccagtttatcacctgggaa
cacccgctgatccgcaacggtctggacctgatcctctccggcgataccggcagcagcacc
atctccctgttgaaaaacaaggcgctgccggtgggcaccctgctggtggagctgatctac
gttgtggaagcgcaggcgccgaaacagctgcagctcaaccgcttcctgccgccaacaccg
gtgcgtctgctgctggataaaaacggcacgaacctggcgggacaggttgaattcgagagt
ttcaaccgacagctgagcgcggtaaaccgccacacgggcagcaagctggtgaacgcggta
cagcaggatgtgcacgctattctgcaactgggcgaaacccagattgaaaaagcggccaga
gcgctgattgacgccgcgcgcagtgaagccgacgagaaactgtctgcggagctgtcccgt
ctggaagcgttaaaagccgtcaacccgaacatccgcgacgacgagctggcggcgattgaa
agcaaccgtcagcaggtgctggaaagcctgaatcaggctggctggcgtctggatgccctg
cgtcttatcgttgtgacgcatcagtaa
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