Enterococcus sp. CR-Ec1: CXM95_05565
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Entry
CXM95_05565 CDS
T10252
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
eni Enterococcus sp. CR-Ec1
Pathway
eni02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eni00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CXM95_05565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eni03021
]
CXM95_05565
Transcription machinery [BR:
eni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CXM95_05565
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AUJ84934
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Position
1158034..1159140
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AA seq
368 aa
AA seq
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MAEETKKTYDKAVAEYIRENKTKGQVVYDDITNRLATPYTLDADAMDKLIQKLEDSGISV
VDENGEPSVHSLKSNEKRQETQPQEDLSAPTGVKINDPVRMYLKEIGRVPLLTAEEEVAL
ALKIEEGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIG
AEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPAEHAAYELLKEQL
EDVLDTLTDREENVLRLRFGIDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaacaaaaaaaacgtatgacaaagcagttgccgaatacatccgagaaaac
aaaacaaaggggcaagttgtttacgatgacattaccaatcgtttagcaacgccttatact
ttggatgctgatgcaatggacaaactaattcaaaaactggaggattccggcatcagtgtc
gtggatgaaaatggagagccttcagtccatagtttaaagagtaatgaaaaacgacaagaa
acccaacctcaagaagatttgtctgcaccgactggtgtgaaaatcaatgaccctgtgcgg
atgtacttgaaagagatcggtcgggtaccgcttttgaccgcagaagaagaagtggctctc
gctctgaaaatcgaagaaggcgaccaagaagcgaaacagcgtttggcagaagccaactta
cgtttggtagtcagcatcgccaaacgttatgtgggtcggggaatgcaatttcttgatttg
atccaagaaggaaacatgggcttgatgaaagccgttgagaaatttgattatcgcaaaggg
tttaaattctcgacctatgcgacctggtggatccgtcaagcgatcactcgtgccatcgct
gaccaagctcgaaccattcggatcccagtgcatatggtggaaaccatcaacaaattgatt
cgtatccaacggcaattattgcaagacttaggacgcgaaccgacaccagaagaaatcggc
gcagaaatggatttgccaacggaaaaagttcgtgaaatcttgaagatcgctcaagagccc
gtttcattagaaacaccaatcggtgaagaagatgattctcatctaggtgattttattgag
gaccaagatgctacaagtccggcagagcatgcggcttatgagcttttgaaagagcaatta
gaagatgtattggatacgttaactgaccgtgaagaaaatgtgctacgcttgcgtttcgga
atcgatgatggccgtactcggaccttagaagaagtcggcaaagtctttggggtaaccaga
gaacggattcgtcagattgaagcaaaagcgttacggaaactacgccacccatctcgttca
aaacaattgaaagatttcttagaataa
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