Enterococcus sp. CR-Ec1: CXM95_14785
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Entry
CXM95_14785 CDS
T10252
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eni Enterococcus sp. CR-Ec1
Pathway
eni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CXM95_14785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eni03021
]
CXM95_14785
03019 Messenger RNA biogenesis [BR:
eni03019
]
CXM95_14785
Transcription machinery [BR:
eni03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CXM95_14785
Messenger RNA biogenesis [BR:
eni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CXM95_14785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AUJ86663
LinkDB
All DBs
Position
complement(3103475..3104770)
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AA seq
431 aa
AA seq
DB search
MSDYLTMAELENKTLKEIYTFAKEFRIPYYSQMNKKELSLAVIRAQAEKQGFFYMEGILD
IVGQEGYGFLRPINYGPSAEDIYISSSQIRRFSLRNGDKVAGKARPPKESERYYGLMHVE
SVNGKDPEDAKERPHFPALTPLYPNRHLKLETTSGRLSTRMIDMLAPVGFGQRGLIVAPP
KAGKTSILKEIANGITDNYPEVELIVLLIDERPEEVTDLERSVKGDVVSSTFDLQPSNHT
RVSELVLERAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAALYKPKKF
FGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELQLSRSLAERRVFPAIDI
KKSGTRKEELLMSSEQLEETWRLRNNMLGDSLEFTEQFIQFLRKTKKNEEFLAAFHDVHF
GDKRPKRNIKR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattatcttacgatggcagagttggaaaacaaaaccttaaaagagatctacacc
tttgccaaagagtttcgaattccttattacagccaaatgaataaaaaagaattgtcattg
gctgtgatacgggcgcaggcggaaaaacaaggcttcttttatatggaaggaatcttggat
atcgtaggccaagaaggctatggttttttacgtccaatcaactatggaccgagtgcagaa
gatatctatatttcttcttcacagattcgtcggtttagtttgcgtaatggcgataaagtc
gccggtaaggcgcgcccgcctaaggaatctgaacgctattatggattgatgcacgttgag
tctgttaacggcaaagatccagaagatgccaaagagcgcccgcattttccagcgctgacg
cccctttatccgaaccgtcatttaaaattagaaacaacgtcaggacgtctttcgactcgg
atgatcgatatgctggcgccagtgggttttggtcaacgaggactgatcgttgccccgcct
aaagctgggaaaaccagtatattgaaagaaattgccaatgggattacggacaactatcct
gaggtggaattgatcgtacttttgatcgacgagcgtccagaagaagtaactgatctagaa
cgtagtgtcaagggtgacgtggtttcttcaacctttgacctacagcctagcaatcatacc
cgtgtttcagaattggtactagaacgggcgatgcgcttggtggaagacaagcgtgatgtc
gtgattttgatggatagtatcactcgtttggcgagagcttataacttagtcgttcctcca
agcggacgtacactaagcggcgggatcgatccagctgctttgtacaaaccgaagaaattc
tttggcgctgcccgcaatattgaagaaggcggtagtttgacgatccttgccacagctttg
gtagataccggcagccgcatggatgatgtcatctatgaagagtttaaaggaaccggcaat
atggagctgcagctttctcgcagcctcgcagaacgccgggtcttcccagcgatcgacatc
aagaaatctggtacccgtaaagaagaattgctgatgagcagtgaacaattggaagaaact
tggcgcttacgcaacaacatgttgggggattccttggagttcacagaacaattcattcaa
ttcttgcgcaaaacgaaaaagaatgaagagtttttagcggcttttcatgatgtccatttc
ggagacaagcggccaaaaagaaatataaaaagataa
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