Enterococcus sp. CR-Ec1: CXM95_17885
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Entry
CXM95_17885 CDS
T10252
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eni Enterococcus sp. CR-Ec1
Pathway
eni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CXM95_17885 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eni03021
]
CXM95_17885 (rpoB)
03400 DNA repair and recombination proteins [BR:
eni03400
]
CXM95_17885 (rpoB)
Enzymes [BR:
eni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CXM95_17885 (rpoB)
Transcription machinery [BR:
eni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CXM95_17885 (rpoB)
DNA repair and recombination proteins [BR:
eni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CXM95_17885 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AUJ87209
LinkDB
All DBs
Position
complement(3725328..3728954)
Genome browser
AA seq
1208 aa
AA seq
DB search
MKSLAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIEG
FNGNLSLEFVDYELKEPKYTVEEARAHDANYSAPLHVTLRLTNRETGEIKSQEVFFGDFP
LMTEQGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAK
DISYVRIDRTRKIPLTVLVRALGFGSDDTIFEIFGDSESLRNTIEKDLHKNASDSRTEEG
LKDVYERLRPGEPKTADSSRSLLNARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLAE
TLVDPETGEIIVEKGTVLTHQVMETLGAFIDNGLNSVTYYPSEDGVVTEPMTVQVIKVFS
PKDPEQEVNVIGNGYPDTATRTVRPADIIASMSYFFNLMEGIGNVDDIDHLGNRRIRSVG
ELLQNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQ
TNPLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLAS
YAKVNKYGFIETPYRRVDRETGRVTDKIDYLTADTEDHYVVAQANSLLNEDGSFVNDVVM
ARATSENLEVSIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINP
KAPWVGTGMEYKSAHDSGAALLCKHDGIVEYVDAAEVRVRRDNGALDVYSVTKFRRSNSG
TSYNQRPLVALGEKVEKGDILADGPSMEQGEMALGQNVLVAFMTWEGYNYEDAIIMSRRL
VKDDVYTSVHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVKDGDL
LVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDEL
SPGVNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMAARQLGIHVATPVFDGASDEDVWATVAEAGMASDAKTVLYDGR
TGEPFDGRISVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLD
MRVLDIDDAEIELRDMDDDDDDLITVDALTKFAEQQTARELEQKAQTEAKNAADALNQQI
ETAEDRLQ
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagcttggctggacacgtagtaaaatacggaaagcatcgcgaacgtagaagtttc
gcacggatcagtgaagtattagaattaccgaatttgattgaaattcaaaccgactcttac
caatggttcctagatgagggcctaagagaaatgtttgaagatattttgccaatcgaagga
ttcaacggtaacttgtccctagaatttgtggattatgaattgaaagaaccaaagtataca
gtagaagaagcacgtgcccatgatgcaaactattcggcaccattacatgttactttgcgt
ttgacgaaccgtgaaaccggggaaatcaaatcccaagaagtattctttggtgatttccca
ttaatgactgaacaaggaacctttatcatcaacggggcagaacgggttatcgtttctcag
ttggtccgctctccgggtgtatatttccatggcaaagtcgataaaaacggaaaagaaggc
tttggttcaactgttatccctaaccgcggtgcgtggttagaaatggaaactgatgccaaa
gatatctcatacgtacggattgaccgtacccgtaaaattcctttgacggtcttagtccgt
gccctagggtttggttctgatgacacgatctttgaaattttcggcgacagtgaatcatta
cgtaacacgatcgaaaaagacttgcataaaaacgcaagcgattctcgtaccgaagaagga
ttgaaagatgtttacgaacgtcttcgtccaggcgagccaaaaacagcagacagctcacgc
agcttgctgaacgcacgcttcttcgatccaaaacgttacgacttagcaaatgttggtcgc
tacaaagtaaacaaaaaattagacttgaaaacacgtctattgaacttgaccttagcagaa
accttggttgaccctgaaacaggcgagatcattgttgaaaaaggcactgttttgactcac
caagtcatggaaacactaggcgcatttatcgataatggcctaaacagtgtaacgtactat
ccatcagaagatggggtcgttaccgaaccaatgacggtccaagtcatcaaagtcttttca
ccaaaagatccagaacaagaagtcaacgtgatcggtaatggctatccagatactgcgaca
cgtaccgttcgtccagcagacatcattgcttcaatgagctacttcttcaacttgatggaa
ggcatcggcaatgtcgatgacatcgaccacttaggaaaccgtcggattcgttctgttggt
gaattattgcaaaaccaattccggatcgggcttgctcggatggaacgtgtcgttcgtgaa
cggatgtcgatccaagacaccgaaaccttgacaccgcaacaattgatcaatattcgtcca
gttgtcgcaagtatcaaagaattctttggttcttctcagttgtcacagttcatggaccaa
acaaacccactgggtgagttgacccataaacgtcgtctatctgccttaggacctggtggt
ttgacccgtgaccgtgccggctatgaagtccgagacgttcactattcccactatggccgt
atgtgtccgatcgaaacgcctgagggaccaaacatcgggttgatcaacagcttggcctct
tatgccaaagtcaacaagtatggcttcattgaaacaccataccgtcgagttgaccgcgaa
acaggccgtgttacagacaaaatcgattacttgactgccgataccgaagaccactacgtt
gtggcccaagcaaacagcttgttaaatgaagacggctctttcgtaaacgacgttgttatg
gcgcgtgctacttctgaaaacttggaagtatcgatcgataaagtcgactacatggacgta
tcaccaaaacaagtagtcgcagtcgcaaccgcatgtattcctttcttggaaaacgatgac
tccaaccgtgccttgatgggtgccaacatgcagcggcaagctgtaccattgatcaatccg
aaagcaccttgggttggtactggtatggaatacaaatcagcacatgactcaggagctgct
ttgttatgtaaacatgatgggatcgtagaatacgtggatgcagccgaagtgcgcgttcgt
cgtgacaatggcgcattagacgtttattctgttaccaaattccgtcgttcaaactcagga
accagctacaaccaacgtccattagtggcacttggtgaaaaagtggaaaaaggcgacatc
ttagcagatggcccatctatggaacaaggtgaaatggcattaggacaaaacgtcttagtc
gcattcatgacttgggaagggtacaactatgaagatgccatcatcatgagccgtcgtttg
gtaaaagatgatgtttacacttctgtccatattgaagaatatgaatcagaagcccgcgac
acaaaattaggacctgaagaaatcactcgcgaaatcccgaacgttggggaagacgcgttg
aaagacctagacgaaatgggcattatccgcattggtgcggaagtcaaagatggcgatctg
cttgttgggaaagtcactccaaaaggggtaacggaactttcagcagaagagcgtttgttg
cacgcaatctttggtgaaaaagcccgcgaagtgcgtgacacatctctacgcgtgcctcac
ggcggcggcggaatcgtccacgatgtcaaaatctttacccgcgaagctggcgatgaattg
tcaccaggtgtgaacatgctggttcgcgtttatatcgttcaaaaacggaaaatccatgaa
ggggataaaatggccggacgtcacggaaacaaaggggtcgtttctcgcattatgccagaa
gaagacatgcctttcttaccagatggcacaccagtcgatatcatgctgaacccattaggg
gtaccttctcggatgaacattggacaagtattagagttacacttaggaatggctgcgcgt
caattaggcattcacgtggcaacaccagtctttgatggtgccagcgatgaagatgtttgg
gcaacggttgctgaagcaggaatggccagcgatgccaaaacagtgctttacgacggacgt
accggcgaaccatttgatggccgcatctccgttggtgtcatgtacatgatcaaattggcc
cacatggtcgatgataaattgcatgcccgttccattggaccttactcattggttacgcaa
caaccattgggaggaaaagcccaatttggtggacaacgtttcggagagatggaagtttgg
gcactggaagcatacggtgctgcttacaccttgcaagaaatcttgacctacaaatcagat
gacgtggttggtcgtgtgaaaacatacgaagcgatcgtcaaaggggaaccaattccaaaa
ccaggtgtaccagaatcattccgcgtattagtaaaagaattgcaatcactgggtctagac
atgcgcgtcctagatatcgatgatgcagagatcgaactgcgtgatatggatgatgacgat
gatgatttaatcaccgttgatgccttaacaaaatttgcggagcaacaaacagcccgtgaa
ttagaacaaaaagcacaaacagaagctaaaaatgccgccgacgcgttgaaccaacaaatc
gagacagcagaagatcgcttgcaataa
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