Enterobacter sp. PGRG2: QRD42_00805
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Entry
QRD42_00805 CDS
T11208
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
enj Enterobacter sp. PGRG2
Pathway
enj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QRD42_00805 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enj03400
]
QRD42_00805 (recD)
Enzymes [BR:
enj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QRD42_00805 (recD)
DNA repair and recombination proteins [BR:
enj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QRD42_00805 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
MukB
UvrD_C
SRP54
CbiA
PhoH
DEAD
DUF4277
T2SSE
NPHP3_N
TrwB_AAD_bind
AAA_33
NTPase_1
DO-GTPase1
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
WJD49563
LinkDB
All DBs
Position
complement(199500..201326)
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AA seq
608 aa
AA seq
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MNMQNLLLEAVAQKALRPLDVQFALTVARDDEPAVMLVAALLSRDAGEGHVCLPLSRLSV
AEFNRLYPQLLPLLEEAGVPDDWRAMLLASPAVSAGDEPTPMVLTGERLYLNRMWCNELT
VARFFCEANQPLPVNEDEIKRSLDELFPATDGINWQKIAAAVALTRRISVISGGPGTGKT
TTVAKLLAALVQTANGDKCRIRLAAPTGKAAARLTESLGAALRQLPLSDEQKKRLPDEAS
TLHRLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDR
DQLASVEAGAVLGDICAWVNAGYSPQRAEELSRLTGMQVPCGEQQGAEALRDSLCLLQTS
YRFGSDSGIGQLAAAVNRGDKPAMRAVFSQGFTDIGKSTLQTGDDYQTMIDDALAGYARY
LQLVRDGAPPEDVLAAFSEFQLLCALRDGPFGVGGLNERLEQRLAQKRWLVRHAHSRWYE
GRPVMIARNDSALGLYNGDIGVALDRGQGTRVWFPLPDGTIKSVQPSRLPDHDTAWAMTV
HKSQGSEFDHAALILPGQIVPVVTRELVYTAITRARRRLSLYADDRILAQAIATRTERRS
GLSDIFSL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcagaatttattattagaggccgtggcgcaaaaagcgctgcgtccgctggat
gtgcagtttgcgctgaccgtcgcccgtgacgatgaacccgccgtgatgctggtggcggcg
ttgttaagccgcgatgcgggggaggggcacgtctgcctgccgctgtcgcgcctgtccgtc
gccgagttcaatcgcctgtatccgcagctgttgcccttgctggaagaagcgggcgtaccg
gatgactggcgcgcaatgctgcttgcttcgcctgcggtgagcgcaggagatgagccgacg
cccatggtgctgaccggtgagcggttgtatctcaaccggatgtggtgcaatgagctgacg
gtggcgcgctttttctgcgaggccaaccagccgctgccggtgaatgaagatgaaattaaa
cgatcgctggatgaactctttccggcaaccgacggcatcaactggcagaaaatcgccgcc
gccgtggcgctgacaagacggatctcggtgatctccggcgggccgggcacgggtaaaacc
accaccgtcgctaaactgctggcggcgctggtgcagaccgccaacggcgacaaatgccgt
atccggctggcggcgcctaccggcaaagccgccgcgcgactgaccgaatcgctcggcgcg
gcgctgcgccagctgccgttaagcgatgagcaaaagaaacgtctgccggatgaggccagt
acgctgcaccgcttgctgggggcgcagccgggcagtcagcgcctgcgctaccatgcgggc
aacccgctgcatctggacgtgctggtggtggatgaagcctccatgatcgacctgccgatg
atgtcgcggcttatcgacgcgctgccgccgcacgggcgggtgattttccttggcgatcgc
gatcagctggcgtcggtggaagccggtgcggtgctgggggatatctgcgcctgggtgaac
gctggttacagcccacagcgtgctgaagagctgtcgcgtctcacaggcatgcaggtgccc
tgcggcgaacaacagggcgcagaggcgctgcgtgacagcctctgcctgctgcaaaccagt
taccgcttcggcagcgattccggtatcggccagctggcggccgcggtaaaccggggcgat
aagcccgccatgcgcgcggtcttcagccagggctttaccgacatcggcaaaagcacccta
cagaccggcgatgattatcagaccatgatcgatgatgcgctggcaggttatgcgcgttat
ttacaactggtacgcgacggcgcgccgccggaagacgtgctggcggcgttcagcgagttt
cagttgctgtgcgcgctgcgcgacgggccctttggcgtcggcggtttaaacgagcgcctt
gagcaacgactggcgcagaaacgctggctggtgcgtcatgcccactcccgctggtacgaa
gggcgtccggtgatgattgcccgcaacgacagcgcgctggggctgtataacggcgatatc
ggcgtggcgctggatcgcgggcaggggacgcgcgtctggttcccgctgccggacggcacc
atcaagtctgtgcagccgagccgtttaccggatcacgataccgcctgggcgatgacggta
cataaatcccaggggtcggagtttgaccatgcggcgctgattttgccggggcagattgtg
ccggtggtgacccgcgagctggtgtataccgccatcacccgtgcgcggcgcaggctgtcg
ctgtatgccgatgaccgtattctggcgcaggcgattgccacccgcaccgagcggcgcagc
ggattaagcgacatcttttcactgtga
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