Enterobacter sp. PGRG2: QRD42_02355
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Entry
QRD42_02355 CDS
T11208
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
enj Enterobacter sp. PGRG2
Pathway
enj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QRD42_02355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enj03019
]
QRD42_02355
03009 Ribosome biogenesis [BR:
enj03009
]
QRD42_02355
Enzymes [BR:
enj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QRD42_02355
Messenger RNA biogenesis [BR:
enj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QRD42_02355
Ribosome biogenesis [BR:
enj03009
]
Prokaryotic type
rRNA helicases
QRD42_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DeaD_C
AAA_22
Cas3-like_C_2
LisH_WDR26
DRTGG
Motif
Other DBs
NCBI-ProteinID:
WJD51199
UniProt:
A0AAT9V4P9
LinkDB
All DBs
Position
complement(570268..572175)
Genome browser
AA seq
635 aa
AA seq
DB search
MTDTIETTFSDLGLNASILQALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA
FSLPLLHNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSNLKGLVLDEADEMLRMGFIEDVETIMAEIPA
EHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
IERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDLYRGLLSKIQPSADEELD
IETLAAALLKMAQGERPLILPPEAPMRPKREFRDRDERFERRGDRNDRGPRAERGGEDRP
RRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKG
MPGEVLQHFTRTRILNKPMNMQLLGDAQPHERRGGDRPAGERRFGGGERREGGRGPRREG
AAPGAGRFSGERREGSRGPRREDGAASGRRRFGDA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccatcgaaaccactttttctgatcttgggctgaatgcctccatccttcag
gccctgaacgatctgggttacgaaaagccatctccaatccaggcagagtgtatcccacat
ctgctgggtggccgcgatgttctgggtatggcccagaccggtagcggcaaaaccgcagcg
ttctctttaccgctgctgcacaacctcgatcctgagctgaaagcgccacagattctggtg
ctggccccgacccgcgaactggcggttcaggttgctgaagccatgacggacttctctaaa
catatgcacggcgtaaacgtggtagccctttacggcggccagcgttatgacgtgcagctg
cgcgccctgcgtcagggcccacaaattgttgtgggtaccccgggtcgcctgcttgatcac
ttaaaacgcggcacgctgaacctgtccaacctgaaaggtctggtactggacgaagcggat
gaaatgctgcgtatgggcttcatcgaagacgttgaaaccatcatggctgagatcccggct
gaacatcagaccgcgctgttctccgccaccatgccggaagcgatccgtcgcattacccgc
cgctttatgaaagagccgcaggaagtgcgcattcagtccagcgtaaccactcgcccggac
atcagccagagctactggtctgtatacggtatgcgtaaaaacgaagcgctggtgcgtttc
ctggaagcagaagactttgacgcggcgatcatcttcgtgcgtaccaaaaatgcgaccctg
gaagtggctgaagcgctggagcgcagcggttataacagcgccgcgctgaacggtgacatg
aaccaggcgctgcgtgagcagaccctggagcgtctgaaagatggtcgtctggacatcctg
attgcgaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtcgttaac
tacgacatcccgatggactccgagtcttacgtgcaccgtatcggccgtaccggtcgtgca
ggtcgtgcaggtcgcgcactgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaac
atcgaacgcaccatgaagctgaccattccggaagttgaactgccgaacgcagaactgctg
ggcaaacgccgtctggaaaaattcgccgccaaagtccagcaacagctggaaagcagcgat
ctggatctgtaccgtggcctgctgtcaaaaattcagccttccgctgacgaagagctggac
atcgaaacgctggctgctgcgctactgaaaatggcgcagggcgaacgtccgctgatcctg
ccaccagaagcgccgatgcgtccgaagcgtgaattccgtgaccgtgacgagcgtttcgaa
cgccgtggcgatcgcaacgaccgtggtccgcgtgctgagcgtggcggtgaagatcgtccg
cgtcgtgagcgtcgtgacgctggcgaaatggaactgtatcgtattgaagtgggccgtgat
gatggtgttgaagttcgtcatatcgttggcgctatcgctaacgaaggcgacatcagcagc
cgttacatcggtaacatcaagctgttcggtactcactccaccatcgaactgccgaaaggt
atgccgggcgaagttctgcaacactttacccgtacgcgtatcctgaacaagccgatgaat
atgcagctgctgggtgatgcacagccgcacgaacgtcgcggtggcgatcgtcctgccggc
gaacgtcgcttcggtggcggtgagcgtcgcgaaggtggccgtggcccacgtcgtgaaggc
gcagcgccaggcgctggccgtttcagcggcgaacgtcgtgaaggcagccgtggtccgcgt
cgcgaagacggtgccgcatccggtcgtcgtcgcttcggtgatgcataa
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