Enterobacter sp. PGRG2: QRD42_04025
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Entry
QRD42_04025 CDS
T11208
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
enj Enterobacter sp. PGRG2
Pathway
enj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QRD42_04025 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enj03019
]
QRD42_04025 (recQ)
03400 DNA repair and recombination proteins [BR:
enj03400
]
QRD42_04025 (recQ)
Enzymes [BR:
enj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRD42_04025 (recQ)
Messenger RNA biogenesis [BR:
enj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QRD42_04025 (recQ)
DNA repair and recombination proteins [BR:
enj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QRD42_04025 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WJD50159
UniProt:
A0AAT9V3T2
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All DBs
Position
complement(948379..950208)
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AA seq
609 aa
AA seq
DB search
MAQAEVMNQASLAKQVLQETFGYQQFRPGQQTIIDTVLEGRDCLVVMPTGGGKSLCYQIP
ALVLEGLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRNGQIRLLY
IAPERLMLDNFLEHLAHWNPALVAVDEAHCISQWGHDFRPEYAALGQLRARFPALPFMAL
TATADDTTRHDIVHLLGLKDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQDQKGKSGI
IYCNSRAKVEDTAARLQSRGFSAGAYHAGLENSVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMGWLRKCLEEKPPGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPRRYDGLMDAQKAL
SAIYRVGQRFGMGYVVEVLRGANNQRIRELGHDKLKIYGEGRDHTTEHWVSVIRQLIHLG
VVTQNIAQHSALQLTEAARPFLRAEVPLQLAVPRVVAIKARNNPKVFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQTPITASEMLSVNGVGMRKLERFGKEFMALIR
SHVDGDDDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtaatgaatcaggcatcgctggcgaaacaggtcttgcaggaaacc
ttcggctatcagcaattccgccccggtcagcaaacaatcattgataccgtgctggaaggc
cgcgactgtctggtcgtgatgcccaccggcggcggcaaatccctgtgctatcagatcccg
gcgctggtgctcgaagggctgaccattgtcgtgtctcctctgatctcgctaatgaaagac
caggtggatcaactgctggcgaacggcgtggccgccgcctgtcttaactcgacacaaacc
cgcgagcagcagcaagaggtgatggcgggctgtagaaacggtcaaatccgcttgctgtac
atcgctcctgaacgcctgatgctggataacttccttgagcatcttgctcactggaacccg
gcactggtcgccgtcgatgaagcgcactgtatttcccagtggggccatgatttccgcccg
gaatacgccgccctggggcagctgcgtgcgcgcttcccggcgctgccgtttatggcgctg
accgccacggctgacgacaccacccgccatgatattgtgcacctgctgggtcttaaggat
ccgctgatccaggtcagcagcttcgaccgcccgaacatccgctatatgctgatggaaaag
ttcaagcccctcgatcagctgctgcgttatgtgcaggatcagaaaggcaaatccggcatt
atctactgtaacagccgcgccaaagtggaagacaccgccgcccgtctgcaaagccggggt
ttcagcgccggagcctatcatgccgggctggaaaacagcgttcgcgccgaagttcaggag
aagttccagcgcgacgatctgcaaatcgtggtggcgacggtagccttcggcatgggcatc
aacaagccgaacgtgcgctttgtggtgcatttcgacattccgcgcaatatcgaatcctac
tatcaggaaaccggtcgcgccgggcgtgacggcctgcccgctgaagccatgctgttctac
gatccggccgatatgggctggctgcgtaaatgtctggaagagaagccgcccggccagctg
caggatatcgagcgccacaagctgaacgccatgggggcgttcgcggaagcacaaacctgc
cgccgtctggtgctgctcaactattttggtgaaggtcgtcaggagccgtgcggcaactgc
gatatttgcctcgatccgccgcgccggtacgacgggctgatggacgcgcaaaaggcgctg
tcggcgatttatcgcgttggccagcgcttcggtatgggttatgtcgtggaagtgctgcgc
ggcgcgaataatcagcgtatccgcgaactgggccatgacaaacttaaaatctacggcgaa
gggcgcgaccatacgaccgagcactgggtcagcgtgatccgccagctgatccatcttggc
gtggtaacgcaaaatatcgcccagcattcagcgctacagcttaccgaggccgcgcgtccg
ttcctgcgggcggaagtcccgctgcagctcgccgtaccgcgcgtggtggccatcaaagcg
cgtaataacccgaaagtcttcggcggcaactatgaccgcaagctgttcgccaaactgcgc
aaactgcgtaaggccattgccgatgaagagaatatcccgccgtatgtggtatttaacgat
gcaacgctgattgagatggcggagcagacgccgatcaccgccagcgaaatgctgagcgtt
aacggcgtggggatgcgtaagctcgaacgttttggcaaagagtttatggcgctgatccgc
tcgcatgtcgatggtgacgatgacgagtag
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