Enterobacter sp. PGRG2: QRD42_11600
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Entry
QRD42_11600 CDS
T11208
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
enj Enterobacter sp. PGRG2
Pathway
enj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QRD42_11600 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enj03019
]
QRD42_11600 (rhlE)
Enzymes [BR:
enj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QRD42_11600 (rhlE)
Messenger RNA biogenesis [BR:
enj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QRD42_11600 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
DUF6482
Motif
Other DBs
NCBI-ProteinID:
WJD47951
LinkDB
All DBs
Position
2627062..2628399
Genome browser
AA seq
445 aa
AA seq
DB search
MSFDELGLNPEILRAVAEQGYREPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLVNNEPHSKARRPVRALILTPTRELAAQVGENVREYSKYLNIRSLVVFGGVSINPQML
KLRGGVDVLVATPGRLLDLEHQNAVKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPKK
RQNLLFSATFSDEIKGLAEKLLHNPLEIEVARRNTASEQITQHVHFVDKKRKRELLSQLI
GQGDWRQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDLRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAVPGYEPDPSIKAEPIQNGRQQRGGGGGRGQGGNGRSQQPRRNDSAAPG
ARRSSEAKPAGEKPRRPRPRKPAAQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatgaactgggtttaaaccctgagatcctgcgcgccgttgccgagcagggc
taccgcgaacctactcctattcagcagcaggccattccggccgtgttgcaggggcgcgac
ctgatggccagcgctcaaaccggtaccggcaaaaccgcaggcttcacgctgccgttactg
cagcacctggtgaacaacgagccgcacagcaaagcccgccgtccggtgcgcgcgctgatc
ctgacgccaacccgtgagctggcggcccaggtgggcgaaaacgtccgtgaatacagcaaa
tacctgaatatccgctcgctggtggtgttcggcggcgtgagcattaacccgcagatgctg
aaactgcgcggcggcgtggacgtactggtggcgacaccgggacgcttactggatctggaa
caccagaacgccgtgaagctcgacagcgtggagatcctcgtgctggacgaagcagatcgc
atgctcgacatgggcttcattcacgacatccgccgtgtgctggcgaagctgccgaaaaag
cgtcagaacctgctgttctccgccaccttctctgatgagatcaagggtcttgcggaaaag
ctgctgcacaacccgctggaaatcgaagtggcgcgtcgcaacaccgcctctgagcagatc
acccagcacgttcactttgtggataaaaaacgcaaacgggaactgctgtcacagctgatc
ggccagggcgactggcggcaggtgctggtgtttacccgtaccaagcacggcgcgaaccat
ctggcggagcagctgaacaaagacggcatccgcagcgcggcgatccacggcaataaaagc
cagggcgcacgtacccgggcgctggctgatttcaaatccggcgatctgcgtgtactggtg
gcgacggatatcgccgcccgtggactggacatcgaagagctgccgcacgtggtgaactat
gaactgccaaacgtgccggaagactatgtgcaccgtattggccgtacaggccgtgctgcc
gccaccggcgaggctctatcgctggtgtgcgtcgatgagcacaaactgctgcgcgatatt
gaacgtctgctgaaaaaagagatcccgcgtatcgccgtaccgggctatgagccggatccg
tccatcaaggcggaacctattcagaacggtcgccagcagcgtggcggcggcggtggacgc
gggcagggcggcaatggccgcagccagcagccacgccgtaacgacagcgcagcgcctggc
gcgcgccgcagcagcgaggcaaaaccggccggtgaaaaaccccgtcgtccgcgtccgcgc
aaaccggcggcccagtaa
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