Enterobacter cloacae subsp. dissolvens SDM: A3UG_10720
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Entry
A3UG_10720 CDS
T02159
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
enl
Enterobacter cloacae subsp. dissolvens SDM
Brite
KEGG Orthology (KO) [BR:
enl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enl03019
]
A3UG_10720
Enzymes [BR:
enl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A3UG_10720
Messenger RNA biogenesis [BR:
enl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A3UG_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
WHD_HA2
T2SSE
nSTAND3
nSTAND_NTPase5
ResIII
NACHT
SLFN-g3_helicase
DUF6145
NTPase_1
PhoH
AAA_16
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AFM59878
LinkDB
All DBs
Position
2310074..2313919
Genome browser
AA seq
1281 aa
AA seq
DB search
MLRDKQRFARRLHGVKKVKNPDAQQAIFQEMAKEIEQAAGKVVLREAARPAITYPENLPV
SQKKQEILNAVRDHQVVIVAGETGSGKTTQLPKICMELGRGVKGLIGHTQPRRLAARTVA
NRIAEELQTEAGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELGNESAGDILIFMSGEREIRDTADALSKRDLRHTE
ILPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
VQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQATAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
NLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
REIHIALLTGLLSHIGMKDAEKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRL
WGRIAARIDPEWVEPVAQHLLKRSYSEPHWERAQGAVMATEKVTVYGLPVVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDEALFEFY
DQRISHDVISARHFDSWWKKASKETPDLLNFEKSMLIKEGAESVSKLDYPNFWHQGNLKL
RLTYQFEPGTDADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
PAPNYAEAFLGRVTPLELPLLDALEREFRRMTGTTIDREDWNWDQVPDHLKITFRVVDDK
NKKLQEGRALTALKEALKGKVQETLSAVADEGIEQSGLHIWSFGQLPESYEQKRGNYKVK
AWPALVDERDSVAIKLFDNPQEQQQMMWRGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
NPYGKVLDLIDDCISCGVDKLIHEAGGPVWSEEGFAQLHEKVRAELNDTVVDIAKQVEQI
LTTVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTGNGFNRLGDTLRYLQAIEKR
LEKMAIDPHRDRAQMLKVENVQQAWQQWLNKLPPARRDDEDVQAIRWMIEELRVSFFAQQ
LGTPYPISDKRILQAMEQVSA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgataaacagcgctttgctcgccgcttgcacggggtgaagaaggttaaaaat
cctgatgcacaacaggccattttccaggagatggcgaaagagattgaacaggcggcaggg
aaggttgtgctgcgcgaagcggcacgtccggccatcacctatccggaaaacctgcccgtc
agtcagaaaaagcaggaaatcctcaacgccgtgcgcgaccaccaggtggtgatcgtggca
ggggaaaccggttcggggaaaaccacacagctgccgaaaatctgtatggagctgggccgc
ggggtgaagggcctgattggccacacccagccgcgtcgtctggcggcgcgtaccgtggcg
aaccgtattgccgaagagttgcaaacggaggcgggcggctgcatcggttataaggtgcga
ttcagcgatcacgtcagcgataacaccatggtcaagctgatgaccgacggtatcctgctg
gcggaaattcagcaggatcgtctgctgatgcagtacgacaccatcattatcgatgaggcg
cacgagcgcagtctgaacatcgacttcctgctcggttacctgaaagagctgctgccgcgt
cgcccggatctgaaaattatcatcacctccgcgaccatcgacccggaacgcttctcaaag
catttcaataacgcaccgataatcgaagtttccggccgtacgtacccggtagaagtgcgc
tatcgcccgattgtcgaagaggcggatgataccgagcgcgaccagctgcaggctattttt
gatgccgttgacgaactgggcaatgagagcgcgggcgacattctgatctttatgagcggc
gagcgtgagatccgcgataccgccgatgcgctcagcaagcgcgatctgcgccacacagag
atcctgccgctttatgcgcgcctctccaacagcgaacagaaccgcgtgttccagccgcac
agcgggcgacgcatcgtgctggcgaccaacgtagcggaaacctcgctgaccgtgccgggc
atcaagtatgtgattgatccgggtacggcgcgtatcagccgctacagctaccgtaccaag
gtacagcgtctgccgattgagccggtttcacaggcctcggccaaccagcgtaaagggcgc
tgtggacgtgtgtcggaggggatctgtatccgtctctattcggaagacgatttcctctcc
cgcccggagtttaccgacccggagatcctgcggaccaacctggcctccgtcatcctgcag
atgaccgccctggggctgggtgatatcgccgctttcccgtttgttgaagcgccggacaaa
cgcaatattcaggacggcgtgcgtctgctggaagagctgggagcgatcaccaccgacgag
caggctaccgcgtataaactgacgccgctggggcgtcagctcagccagttaccggtcgac
ccgcgtctggcgcgcatggtgctggaagcgcaaaaacacggctgcgtgcgcgaggcgatg
atcatcacctcggcgctctccattcaggatccgcgtgaacggccaatggacaaacagcag
gcgtcggatgagaaacaccgtcgcttccacgacaaagagtctgatttcctcgcctttgtg
aacctgtggaactacctcggcgagcagcagaaggcgctctcctcgaaccagttccgccgt
cagtgccgcgtggatttcctcaactacctgcgcgtgcgcgagtggcaggatatttacacc
caactgcgtcaggtggtgaaagagctgggtattccggtgaacagtgaaccggcggagtac
cgcgaaattcacatcgcattgctgaccggactgctgtcccatatcggcatgaaggacgcc
gaaaagcaggagtataccggtgcgcgcaacgcccgtttctccatcttccccggctccggg
ttgttcaagaaaccacccaagtggaccatggttgccgaactggtggaaaccagccgcctg
tgggggcgtattgctgcgcgtatcgatccggaatgggtggagccggtggcgcaacacctg
ctgaagcgttcgtacagtgaaccgcactgggagcgcgcgcagggggcggtgatggcgacg
gaaaaagtgaccgtctacggtctgccggtggtggccgcgcgtaaggtcaactacagccag
attgatccggcgctgtgccgcgagctgtttatccgccatgcgctggtggagggcgactgg
cagacgcgtcacgccttcttccgtgaaaacctcaaactgcgtgccgaagtggaagagctg
gagcacaaatcccgtcgtcgcgacattctggtggatgacgaggcgctgttcgagttttac
gaccagcgcatcagccacgatgtcatttccgcccgtcactttgacagctggtggaagaag
gccagcaaagagacgccggacctgctcaactttgaaaagagcatgctgattaaagaaggg
gcggagtcggtcagtaagctcgactacccgaacttctggcatcagggcaaccttaagctg
cggctgacctatcagtttgagccgggaacggacgcggatggtgtcaccgttcatatcccg
ctgccgctactaaaccaggtggatgagagcggatttgagtggcaaattcccggcctgcgc
cgcgagctggtgattgcgctgatcaaatcgctgcctaaaccggtgcgccgtaactttgtt
ccggcccctaactacgctgaagcgtttttaggccgcgtcacgccgctggagctgccgctg
ctggatgcgctggagcgtgagttccgccgcatgaccggcaccaccattgaccgcgaagac
tggaactgggatcaggtgcccgatcacctgaaaatcactttccgcgtggtggacgataaa
aacaagaagctgcaggaaggccgtgcgctcaccgcactgaaagaggcgctgaaaggcaaa
gtgcaggagaccttatccgcggtggcggatgaggggattgagcagagcgggctgcacatc
tggagctttggtcagctcccggaaagttacgagcaaaaacgcggcaattacaaagtgaag
gcctggcctgcgctggtggatgagcgcgacagcgtggcgatcaagctgtttgataacccg
caggaacagcagcagatgatgtggcgcgggctgcgccgcctcctgcttctgaatatcccg
tcgccgattaagtatctgcacgagaagctgccgaacaaagccaagctcggcctctacttt
aacccgtacggcaaagtgctggatctgatcgacgactgcatctcctgcggcgtggacaaa
ctcatccacgaggcgggcggtccggtctggtcagaagagggctttgctcagctacatgaa
aaggtgcgcgcggagctcaacgacaccgtggtggacattgccaaacaggtcgagcagatc
ctcaccaccgtgttcaatatcaataaacgcctgaaagggcgtgtggatatgaccatggcg
ctggggctgtcggatgtcaaagcgcagatggcgggcctggtgtaccggggctttgtcacc
ggcaatggcttcaaccgtctcggcgacacgctgcgttatctgcaggcgattgaaaaacgg
ctggagaaaatggccatcgatccgcaccgtgaccgtgcgcagatgctgaaagtggaaaac
gtgcagcaggcgtggcagcagtggttgaacaaactgccaccggcacgtcgtgacgatgaa
gacgttcaggcgatccgctggatgatcgaagagttacgcgtcagcttctttgcccagcag
ctcggtacgccgtatccgatttcggataaacgtattttgcaggcgatggagcaagtttcc
gcttaa
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