Enterobacter cloacae subsp. dissolvens SDM: A3UG_17135
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Entry
A3UG_17135 CDS
T02159
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
enl
Enterobacter cloacae subsp. dissolvens SDM
Brite
KEGG Orthology (KO) [BR:
enl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
enl03009
]
A3UG_17135
Enzymes [BR:
enl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A3UG_17135
Ribosome biogenesis [BR:
enl03009
]
Prokaryotic type
rRNA helicases
A3UG_17135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
AAA_22
AAA_11
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFM61149
LinkDB
All DBs
Position
3698156..3699484
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDATRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSAAASETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctacttgctg
cctgtgttgcagcatctgctcgattttccacgtaaaaaatcaggcccgccgcgtattttg
atcctgacgcctacccgtgaactggcaatgcaggttgccgatcacgcacgcgagctggca
gcgaatacccatctggatatcgctacgatcaccggcggcgttgcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggacatcgtcgttgcaacgacgggccgtttgctgcagtac
attaaagaagagaactttgactgccgcgcggtagaaaccctgattctggacgaagccgac
cgtatgctggacatgggcttcgcgcaggatatcgaacatatcgccggtgaaacgcgctgg
cgtaaccagacaatgctgttctcagccaccctcgaaggggatgcgatcaaagactttgca
gagcgtctgctggaagatccggtggaagtgtcagcaacgccatctacccgtgagcgcaag
aagatccaccagtggtattaccgcgcagataatcttgagcacaaggttgagttgctgaaa
cacctgcttaagcaggaagacgccacccgcaccatcgtgtttgtgcgtaagcgtgagcgt
gtgcatgagctggctgaaatgctgcgtaatgccgggatcaacaattgctatctcgaaggt
gagatggcgcaggtgaaacgtaccgaaggcattaagcgtctgaccgatggccgcgttaac
gtgctggtcgcaacagacgttgccgcgcgcgggatcgacatcccggacgtgagccatgtg
atcaacttcgatatgcctcgcagcggagatacctatctgcaccgcattggccgtaccggt
cgtgcaggccgcaagggtattgccatttctctggtcgaagcacatgactacctgctgttg
cagaaaattggccgctatgtcgacgagccgctgaaagcgcgcgtcattgatggactgcgt
ccgaccacgcgtgcaccgagtgaaaaaatgacgggcaaaccgtccaagaaagcgctcgcg
aaacgggcggagagaaaagagaaagaaaaagagaagccgcgcgtgaagcagcgtcaccgc
gataccaaaaacattggtaaacgtcgcaagccaagcgctgcagcgtcagaaacgaaaact
gaagagtaa
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