Enterobacter cloacae subsp. dissolvens SDM: A3UG_19520
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Entry
A3UG_19520 CDS
T02159
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
enl
Enterobacter cloacae subsp. dissolvens SDM
Pathway
enl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
enl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A3UG_19520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enl03021
]
A3UG_19520
Transcription machinery [BR:
enl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3UG_19520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AFM61614
LinkDB
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Position
4209366..4211213
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AA seq
615 aa
AA seq
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MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEESDDDSADDDNSIDPELAREKFAELRTQYEVTRDTIKAK
GRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMP
KKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKEDVHRGLQKLQQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagacatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgctggctgaaacctccaacaacactgacgaagatgcggaagaa
gctgctgcacaggtactgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtacatgcgcgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgcaaaacgcatcgaagacgggatcaaccaggttcagtgctctgttgctgagtacccg
gaagcgatcacctatctgctggagcagtacgatcgcgttgaagcggaagaagcgcgcctg
tccgatctgatcaccggttttgtcgacccgaacgctgaagaagatatggcgccaaccgcc
actcacgtcggttctgaactgtctcaggaagagatggatgacgacgaagacgaagatgaa
gaagagagcgacgacgacagcgccgatgatgacaacagcatcgacccggaactggcacgt
gagaagttcgccgaactgcgtacccagtacgaagtgacgcgtgacaccatcaaagccaaa
ggtcgcagtcacgctgctgctcaggaagagatcctgaaactgtctgaagtcttcaaacag
ttccgcctggtgccaaaacagttcgactacctggttaacagcatgcgcgtgatgatggat
cgcgtacgtacccaggaacgcatcatcatgaaactgtgcgttgagcagtgcaaaatgccg
aagaagaacttcatcaccctcttcaccggcaacgaaaccagcgaaacctggttcaacgcg
gctatcgcgatgaacaagccgtggtctgaaaaactgcacgacgtgaaagaagacgtgcat
cgcggtctgcagaagctgcagcagattgaagaagagaccggcctgaccattgagcaggtt
aaagacatcaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgcgaagaaagag
atggttgaagcaaacttacgtctggttatctctatcgccaagaaatacaccaaccgcggt
ctgcagttcctggatctgattcaggaaggcaacatcggtctgatgaaagcggtagataag
tttgaataccgtcgtggttacaagttctccacctatgcgacctggtggatccgtcaggcg
attacccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgag
accatcaacaagctcaaccgtatttcccgccagatgctgcaggagatgggccgcgagccg
acgccggaagagctggctgaacgcatgctgatgccagaagacaaaatccgcaaagtgctg
aagatcgccaaagagccaatctccatggaaacaccaatcggtgatgatgaagattcgcat
ctgggtgatttcatcgaggatactaccctcgagctgccgctggactctgccaccaccgag
agcctgcgtgctgccacgcacgacgtgctggctggtctgaccgcccgagaagcgaaagta
ctgcgtatgcgtttcggtattgatatgaataccgaccacacgctggaagaagtgggtaaa
cagttcgatgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactg
cgccatccgagccgctctgaagtgctgcgtagcttcctggacgattaa
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