Enterobacter cloacae subsp. dissolvens SDM: A3UG_22065
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Entry
A3UG_22065 CDS
T02159
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
enl
Enterobacter cloacae subsp. dissolvens SDM
Pathway
enl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3UG_22065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enl03019
]
A3UG_22065
03400 DNA repair and recombination proteins [BR:
enl03400
]
A3UG_22065
Enzymes [BR:
enl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3UG_22065
Messenger RNA biogenesis [BR:
enl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3UG_22065
DNA repair and recombination proteins [BR:
enl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A3UG_22065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AFM62117
LinkDB
All DBs
Position
complement(4758453..4760282)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRLDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGDVELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKAFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcatgaaacc
tttggctatcagcaattccgtcctggccaggaaaccatcattgaaaccgtgctggaaggt
cgtgattgcctggtggtaatgccgaccggtggcggtaaatcgctctgctatcaggtgcct
gcactggtacttaatggcctgacggtcgtggtatcgccgctgatttctctgatgaaagac
caggttgaccaactgctcgccaacggcgtggcagcggcctgtcttaactccacgcaaacc
cgcgagcagcagcaagaggtgatggccggttgccgtaccggacagattcgcttgctgtat
atcgcgccagaacgtctgatgctggataacttcctcgaccatctggcgcactggaatccc
gttctgctggccgttgatgaagcgcactgtatttcgcaatggggccacgacttccgcccg
gaatatgccgcacttggccagcttcgccagcgcttccccgaactgccgtttatggcgctg
accgccacggcagatgacaccacgcggctggatatcgtccgcctgctggggctgaacgac
ccgcttatccaggtcagcagtttcgaccgcccgaacatccgctatatgctgatggaaaag
ttcaagccgctggatcagcttctgcgttatgtgcaggagcagcgcggcaagtcaggcatc
atttactgtaacagccgcgcgaaggtggaagacaccgctgcgcgtctgcaaaaccgcggc
tttagcgcggcggcctatcatgccgggttagaaaaccatatccgcgccgacgtgcaggaa
aaattccagcgcgatgatctgcagattgtggtggcgacggtggcattcgggatgggcatt
aacaagcccaacgtacgctttgtggtgcacttcgatattccgcgaaatatcgaatcctac
tatcaggaaaccggccgcgccggacgtgatggcctgcctgcggaagcgatgctgttttac
gatccggccgatatggcgtggctgcgccgctgtctggaagagaaaccgcagggacagctg
caggatatcgagcgtcacaagctcaacgccatgggtgcgtttgctgaagcgcaaacctgc
cgccgtctggtgctgctcaactactttggtgaagggcgtcaggagccgtgcggcaactgc
gatatctgtctcgacccgccgaagcagtacgatggcctgatggacgcgcgtaaggcgctc
tcgaccatttaccgtgtgaatcagcgcttcgggatgggctatgtggtggaagtgttacgt
ggcgccaataaccagcgtatccgcgacatgggccacgataagttgcccgtctacggtatt
ggtaaggaccagagccacgagcattgggtcagcattattcgccagttgattcacctcggc
tttgccacacagaacatcgcccagcactccgcgcttcagctcaccgaagctgcgcgtccg
gtactgcgcggggatgttgaactcaagctcgccgtgccgcgcgttgtcgccctgaaaccg
cgggtgatgcagaagtcttacggcggcaactacgaccgcaagctgttcgccaaactgcgc
aagctgcgtaaagcgattgccgacgaagaaaacatcccgccgtacgtggtgttcaacgac
gcgacgctgattgagatggccgagcagatgccgctcagcgcgagcgagatgctgagcgtc
aacggcgtcggtacgcgcaagctggagcgctttggtaaagcgttcatggcgctcatccgt
tcacatgccgatggtgatgatgaggagtag
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