Endosymbiont of unidentified scaly snail isolate Monju: EBS_0128
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Entry
EBS_0128 CDS
T04530
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
enm
Endosymbiont of unidentified scaly snail isolate Monju
Pathway
enm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBS_0128 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enm03019
]
EBS_0128 (rhlB)
Enzymes [BR:
enm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EBS_0128 (rhlB)
Messenger RNA biogenesis [BR:
enm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EBS_0128 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAN68116
LinkDB
All DBs
Position
complement(140306..141613)
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AA seq
435 aa
AA seq
DB search
MSDKHLTKTRFDSFPFSQALLDGIHDAGFEYCTPIQAATLPLALDGQDVAGQAQTGTGKT
AAFLLAILHLLDQEPADQRRRANQPRALIVAPTRELAIQIHRDAEVLAGHTGHHVRVVYG
GTAYEKQRKDLEAGVDILIGTPGRLIDYFKQRVFDLRAIQAVLLDEADRMFDLGFIKDIR
YLLRRCPPPERRLSMLFSATLSWRVLELAYEHMNNPQKVEVEAEQITADRVRETGYMVAN
EEKIPLLLGLINRLEDARSIVFVNTKREAERVWGYLEGNGHKAAILSGDVPQKKRERLLK
QFADDEVSVLVATDVAARGLHIPGVTHVFNYDLPDDPEDYVHRIGRTARAGAEGDAVAFI
CETYAFSLPDIEDYIGHKIPMKPVTRELLAEVDPASRVHIERKRRPPRGKGSSKGRPRRR
SRDRGPGGGKGGAAG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagcacctgaccaagacccgtttcgacagcttccccttttctcaggctctt
ctcgacggcatccacgatgccggcttcgagtactgcacgcccatccaggcggccaccctg
ccgctggcgcttgacggccaggacgtggccggccaggcacagaccggcaccggcaagacc
gcggccttcctgctggcgatcctgcacctgctcgaccaggaaccggccgaccagcgccgc
cgcgccaaccagccgcgtgcgctgatcgtggcgccgacccgcgagctggccatccagatc
caccgcgacgccgaggtgctggcgggccacaccggccaccacgtgcgcgtggtctatggc
ggcaccgcctacgagaaacagcgcaaggacctggaggccggggtggacatcctcatcggc
acaccgggccgcctgatcgattacttcaagcaacgggtgttcgacctgcgcgccatccag
gcagtgctactcgacgaggccgaccgcatgttcgacctgggcttcataaaggacatccgc
tacctgttgcggcgctgcccaccgcccgagcgacggctgagcatgctgttctcggccacc
ctctcctggcgcgtcctcgagttggcctacgagcacatgaacaacccgcagaaggtcgag
gttgaggccgagcagatcaccgccgaccgggtgcgcgagaccggctacatggtggccaac
gaggagaagatcccgctgctgctggggctgatcaaccgcctcgaggacgcgcgcagcatc
gtcttcgtcaacaccaagcgcgaggccgagcgtgtctggggctatctggagggcaatggg
cacaaggcggccatcctctcgggcgacgtgccgcagaagaagcgcgaacgcctgctcaag
caatttgccgacgacgaggtctcggtgctggtggccaccgatgtggccgcgcgcggcctg
cacatcccgggcgtgacgcacgtcttcaactatgacctgcccgatgacccggaggactat
gtgcaccgcatcggccgcactgcgcgcgccggcgccgagggcgacgcggtggccttcatc
tgcgagacctatgccttctcactgcccgacatcgaggactacatcggccacaagatcccg
atgaagcctgtcacccgcgagctgctcgccgaggtagatccggccagccgcgtgcacatc
gaacgcaagcgccgccctccacgcggcaaggggagcagcaaggggcggccacgtcgacgc
tcgcgcgaccgcggaccgggtggcggcaaaggcggcgccgccggctga
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