Endosymbiont of unidentified scaly snail isolate Monju: EBS_0268
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Entry
EBS_0268 CDS
T04530
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
enm
Endosymbiont of unidentified scaly snail isolate Monju
Brite
KEGG Orthology (KO) [BR:
enm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enm03021
]
EBS_0268 (rpoH)
Transcription machinery [BR:
enm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EBS_0268 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
KORA
YdaS_toxin
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
BAN68251
UniProt:
S6BGM7
LinkDB
All DBs
Position
complement(293950..294825)
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AA seq
291 aa
AA seq
DB search
MTQQAMNFPSLLPTGSMESYISAAFQLPMLSAEEEHELAVRWRDHKDLEAARQLVLSHLR
FVVRIARGYNGYGLPQNDLIQEGTVGLMKAVRRFNPDMGVRLVSFAVHWIKAEIHEYILR
NWRIVKVATTKAQRKLFFNLRSAKKRLGWFSQEEIEGVAEDLGVKPETVIEMEARLSSHD
VAFDPLEADEDDNAAFTPSAYLADLREEPSRRLEAEDSEQHEHELLIQALEQLDDRSRDI
LQRRWLNEKKETLHELAADYGVSAERIRQIEKAAMKKLRKLMGEEGELLAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaagcaatgaatttccccagcctgctgcccaccggcagcatggagtcctac
atcagcgcggccttccagttgccgatgctcagcgccgaggaagaacacgaactggcggta
cgctggcgtgaccacaaggacctggaagccgcacgccagctggtgctctcgcacctgcgc
ttcgtggtacgcatcgcgcgcggctacaacggctacggcctgccgcaaaacgacctgatc
caggaaggcaccgtgggcctgatgaaggcggtgcgccgcttcaaccccgacatgggtgtg
cgcctggtctccttcgcggtgcactggatcaaggccgagatccatgaatacatcctgcgc
aactggcgcatcgtcaaggtggccaccaccaaggcccagcgcaagctgttcttcaacctg
cgctcggccaagaagcgcctgggctggttctcgcaggaagagatcgagggcgtggccgag
gacctgggcgtcaagcccgagacagtgatcgagatggaggcgcgcctgagcagccacgat
gtcgccttcgacccgctggaggccgacgaagacgacaacgccgccttcacgccctcggcc
tacctggccgacctgcgcgaggagccgtcgcggcgtctggaggccgaagacagcgaacag
cacgagcacgagctgctgatacaagccctcgaacagctcgacgatcgctcgcgcgacatc
ctgcaacgccgctggctgaacgagaagaaggagaccctgcacgagctggctgccgactac
ggcgtatcggccgagcgcatccgccagatcgagaaggcggccatgaaaaagctgcgcaag
ctgatgggcgaagagggcgaactgctggcggcctga
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