Endosymbiont of unidentified scaly snail isolate Monju: EBS_0932
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Entry
EBS_0932 CDS
T04530
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
enm
Endosymbiont of unidentified scaly snail isolate Monju
Pathway
enm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBS_0932 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enm03019
]
EBS_0932 (rhlE)
Enzymes [BR:
enm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EBS_0932 (rhlE)
Messenger RNA biogenesis [BR:
enm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EBS_0932 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAN68866
UniProt:
S6BI86
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All DBs
Position
1027939..1029267
Genome browser
AA seq
442 aa
AA seq
DB search
MTFEQLGLSADILRAVAEQGYSAPTPIQAQAIPVVLEGRDILAGAQTGTGKTAGFTLPLL
HRLAETTRKGSRTVRALILTPTRELAAQVGESVATYGRHLDLRSAVIFGGVKINPQIQQL
RRGVDILIATPGRLLDHVSQGTLDLSRVEILVLDEADRMLDMGFIHDIRKVLAQLPERRQ
NLLFSATFSGEIRALAERLLDAPVSIEVARRNTAAESVAQRVYRVDRGRKAELLAWLIGS
RDWRQVLVFTRTKHGANRLAQYLDKAGPSATAIHGNKSQGARTRALAGFKKGDIRVLVAT
DIAARGLDIDQLPHVVNFELPNVAEDYVHRIGRTGRAGREGEAVSLVCVDEDRLLRDIEK
VIGRRLPAEVLEGYEPDPSIRPEPIQNGRGQRAGGRRSEGARRGGRPGGKRSGSGARRAR
RCRWQYPLHRQQQPRSGDAGVG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgaacagctcggcctctcggccgacatcctgcgcgccgtcgccgaacagggc
tacagcgctcccactcccatccaggcccaggccattcccgtcgtcctcgagggacgagac
attcttgccggggcgcagacgggcaccggcaagacggccgggttcaccctgccattgctg
catcgtctggcggagacaacgcgcaagggcagtcgcacggtgcgcgccctcatcctcacc
ccaacccgtgagctggccgcccaggtaggcgagagcgtggccacctatggccggcatctc
gacctgcgctcggcggtgatcttcggtggggtcaagatcaacccgcagatccagcagctc
cggcgtggcgtggatatcctgatcgccacccccgggcggctgctggatcacgtctcgcag
ggcaccctggacctttcgcgggtcgagatcctggtactcgacgaggccgaccgcatgctc
gacatgggcttcatccacgacatccgcaaggtgctggcgcagctgccggagcgtcggcag
aacctgctgttctcggcgaccttctcgggcgagatccgcgccctggccgaacgcctgctg
gatgcgccggtgtcgatcgaagtggcgcgccgcaacacggccgccgagagtgtggcgcag
cgggtctaccgcgtggaccgcggacgcaaggccgaactgctggcctggctgatcggctcg
cgcgactggcgacaggtgctggtgttcacgcgcaccaagcacggtgccaaccgcctggcg
cagtatctcgacaaggctggcccgagcgccacggcgatccatggcaacaagagccagggc
gcacgcacccgggcgctggccggtttcaagaagggcgacatccgcgtgctcgtggccacc
gacatcgcggcgcgcgggctggatatcgaccagttgccgcacgtggtcaacttcgagctg
cccaatgtcgccgaggactatgtgcatcgcatcgggcgaaccggtcgtgccgggcgcgag
ggcgaggcggtgtccctggtctgcgtggacgaggaccgtctgttgcgtgacatcgagaaa
gtgatcggtcgccgtctgccggccgaggtactggaaggctacgagccggacccctcgatt
cgtcccgagcccattcagaacggaagaggacagcgtgccgggggacggcgcagcgagggc
gcgcgccgcggtgggcgaccgggcggcaagcggtccggttccggtgcgcgacgcgcaagg
cgatgtcgatggcaatacccccttcaccgacaacagcaaccgcgatccggtgatgctggc
gtcgggtga
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