Endosymbiont of unidentified scaly snail isolate Monju: EBS_1258
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Entry
EBS_1258 CDS
T04530
Symbol
rpoS
Name
(GenBank) RNA polymerase nonessential primary-like sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
enm
Endosymbiont of unidentified scaly snail isolate Monju
Brite
KEGG Orthology (KO) [BR:
enm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enm03021
]
EBS_1258 (rpoS)
Transcription machinery [BR:
enm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EBS_1258 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
TetR_N
KORA
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
BAN69164
UniProt:
S6BT10
LinkDB
All DBs
Position
complement(1368515..1369522)
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AA seq
335 aa
AA seq
DB search
MPRKKAAKTSKADESLVDDPVLTAEAATEDVADPIVPPPMVVDEEANKAFEAGVVPDSQL
DATRLYLNEIGASKLLTAEEEVYYSRLAQKGDEAARRKMIECNLRLVVKIARRYMNRGLA
LLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKEI
NAYMRAARKLAQSLDHEPTAEEIADLLDKPIDDVKRLLGLNERTTSVDTPYGKDADKPLL
DTIADEKASDPTTWLQADDINAHLDEWLARLNDKQREVVERRFGLHGYENATLEQVAKEL
GVTRERVRQIQMDALKCLRSILEHEGYNVENVFND
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccacggaagaaagctgccaagacctctaaggccgatgaatctctcgtggacgatcca
gtcctcaccgccgaggcggcaaccgaggatgtcgccgatccgatcgtgcctcctcccatg
gtggtcgacgaggaggccaacaaggccttcgaggccggggtggtacccgatagccagctc
gacgccacgcggctctatctcaacgagatcggtgcttccaagttgctgactgctgaagaa
gaggtctattactcgcggctggcgcaaaagggcgacgaggcagcgcggcgcaagatgatc
gaatgcaatctgcgcctggtggtaaagattgcccggcgctacatgaatcgcggcctggcc
ctgctggacctgatcgaggagggcaatcttggcctgattcgcgcggtcgaaaagttcgat
cccgagcgcggcttccgcttctccacgtacgcgacctggtggatacgccaaaccatcgag
cgcgccatcatgaaccagacgcgcaccatccgcctgcctatccacgtggtcaaggagatc
aacgcctacatgcgtgcggcacggaaactggcgcagagcctggatcacgagcccaccgcc
gaagagatcgcggacctgctcgacaagccgatcgacgacgtgaagcgcctgcttgggttg
aacgagcgcactacctcggtggacaccccttacggcaaggacgctgacaagccgctgctc
gacaccattgccgacgagaaggcctccgatcccaccacctggctccaggccgacgacatc
aacgctcacctcgatgaatggctggccaggctcaacgacaagcagcgcgaggtggtcgag
cgccgcttcggcctgcatggctacgagaatgccacgctcgaacaggtggcgaaggaactg
ggcgtgacccgtgaacgggtgcgacagatccagatggacgcgctcaagtgcctgcgcagc
atcctggagcacgagggctacaacgtggagaacgtgttcaacgactag
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