Endosymbiont of unidentified scaly snail isolate Monju: EBS_1935
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Entry
EBS_1935 CDS
T04530
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein and permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
enm
Endosymbiont of unidentified scaly snail isolate Monju
Pathway
enm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
enm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EBS_1935 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
enm02000
]
EBS_1935 (msbA)
Enzymes [BR:
enm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
EBS_1935 (msbA)
Transporters [BR:
enm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EBS_1935 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_29
AAA_22
AAA_21
nSTAND1
DUF5942
AAA_16
AAA_30
ABC_ATPase
AAA_25
Herpes_UL43
RsgA_GTPase
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BAN69800
UniProt:
S6CGT1
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All DBs
Position
2094960..2096702
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AA seq
580 aa
AA seq
DB search
MQTLPPSSRQTLLRLLGYFRPHWKLFVAGIVGMVLLAASEAGIPGLLKPLLDGTFVEKDP
VYMKWAPVALIVLFLFRGLAQVVSNAAFAAISMHLMHTLREQMFERLLHLPAAFYERTIS
GNLISRFTYDVSQISHAGVQLFSALVKDSLTVVGLLIYVFWLDWQLSLFTFVLLPTVALI
AKYVGRRQRRLSRALQDSFGNMTHVLEETTRGHKVVKIHGGQDYERSRFERIARAIRHQQ
FKLAVAATIGVPIVEFVGALIMAAVIWIGTGRAAEDQLTVGGFVAFFTALGLLFSPIKRL
TKLNDPLQRGLAAAESVFALLDQPLEQDTGTRCLPDTRGALRFEGVRFRYPEAECDALGP
LDLEIAPDSFTALVGASGSGKSTFVSLIPRLHEVSAGRILLDGIDTRELALAELRRHIAF
VDQQVILFNDSIAANIAYGMDADREAIRQAARDAGALEFIEALPESFDTLIGENGIKLSG
GQRQRLAIARALITDARILILDEATSALDTESERLVQQGLERLRTGRTILVIAHRLSTVQ
KADRILVFEAGRVVEDGTHEELMARRGVYHRLNQAQLFGE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccttcctccctccagccgtcagaccctgctgcgcctgctgggctatttccgg
ccacactggaagctctttgtcgccggcatcgtcggcatggtgctgctggccgcttctgaa
gccggcatcccggggctgctcaaacccctgctggacggcaccttcgtcgagaaggacccc
gtctacatgaaatgggcgccggtggcgctgatcgtgctgtttctgttccgtggcctggcc
caggtggtcagcaacgccgcctttgccgccatctccatgcacctgatgcacaccctgcgc
gagcagatgttcgagcgtctgctgcatcttcccgccgccttctacgaacgcaccatcagc
ggcaacctgatctcgcgcttcacttacgacgtcagccagatctcgcacgcgggggtgcag
ctgttcagcgccctggtcaaggactcgctgacagtggtcgggctgctgatctacgtcttc
tggctggactggcaactcagcctgttcaccttcgtcctgctgccgacggtggcgctgatc
gccaagtacgtcggtcgccgccagcgccgactcagccgcgccctgcaggacagcttcggc
aacatgacccatgtgctggaagagaccacccggggacacaaggtggtcaagatccacggt
ggccaggactatgagcgcagccgtttcgaacgcatcgcccgcgccatccgccaccagcag
ttcaagctggcggtcgccgccaccatcggagttcccatcgtcgagttcgtcggcgccctg
atcatggccgcggtgatctggatcggtaccggacgcgccgccgaggaccagctcaccgtg
ggcggtttcgtcgccttcttcaccgcactgggtctgctcttctcgccgatcaagcgcctg
accaagctcaacgatcccttgcaacgtggtctggccgcggccgagagcgtgttcgccctg
ctcgaccagccgctcgaacaggacaccggcacgcgctgcctgccggacacccgcggcgcg
ttgcgcttcgaaggggtacgcttccgctaccccgaagccgaatgcgacgcactgggtccc
ttggacctggagatcgcgccggacagcttcaccgccctggtcggtgcttcaggcagcggc
aagagcaccttcgtgagcctgatcccgcgcctgcacgaggtgagcgccgggcgcatcctg
ctcgacggcatcgacacccgcgagctggcactggccgagctgcgccgtcacatcgccttc
gtcgaccagcaagtgatcctgttcaacgacagcatcgccgccaacatcgcctacggcatg
gatgccgaccgcgaggccatccgccaggccgcacgcgatgccggtgccctggagttcatc
gaggccctgcccgaaagtttcgacacactgatcggcgagaacggtatcaagctctccggc
ggccagcgccagcgcctggccatcgcccgcgcgctgatcaccgatgcccgtatcctgatc
ctcgacgaggccacctcggcgctggacaccgagtcggaacgcctggtgcagcagggcctg
gagcgcctgcgcaccggccgcaccatcctggtcatcgcacaccgcctgtccaccgtgcag
aaggccgaccgcatcctggtcttcgaggccgggcgcgtcgtcgaggacggcacccacgag
gagctgatggcgcgccggggtgtctaccatcggctcaaccaggcgcagctgttcggggaa
tga
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