Euhalothece natronophila: FRE64_08870
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Entry
FRE64_08870 CDS
T06117
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
enn
Euhalothece natronophila
Brite
KEGG Orthology (KO) [BR:
enn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enn03032
]
FRE64_08870 (topA)
03400 DNA repair and recombination proteins [BR:
enn03400
]
FRE64_08870 (topA)
Enzymes [BR:
enn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FRE64_08870 (topA)
DNA replication proteins [BR:
enn03032
]
Prokaryotic type
DNA Topoisomerases
FRE64_08870 (topA)
DNA repair and recombination proteins [BR:
enn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FRE64_08870 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
DUF6739
Motif
Other DBs
NCBI-ProteinID:
QDZ40040
UniProt:
A0A5B8NPC2
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All DBs
Position
1846540..1849341
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AA seq
933 aa
AA seq
DB search
MPTLVIVESPTKARTIRKYLPNDYRVEASMGHVRDLPSSAKEVPAKIKGESWARLGVNVE
NGFEPVYVVPSDKKKVVKELKAALKEADELILATDEDREGESISWHLKELLNPKVPTKRM
VFHEITREAIQEALNQCRDVNDDLVEAQETRRILDRLYGYTLSPLLWNKIARGLSAGRVQ
SVAVRLIVEKERERRAFKSGSYWDLKATLEKEKSEFEAKLITLGGKKLATGSDFDPKTGK
IAKGKDVVLLKEADANALKERLSDKEWTVKQVEEKPTTRKPSPPFTTSTLQQEANRKLKI
SARDTMRTAQSLYENGYITYMRTDSVHLSEQAISAARSCVTSKYGKEYLSPKPRQYSTKS
KGAQEAHEAIRPAGESFRSPQETGLQGREFALYDLIWKRTVASQMANAKLTQISVTLTVE
DAEFRSSGKRIDFPGFFRAYVEGSDDPEAALDNQEVVLPNLKEGDHPNCKKLESLGHETQ
PPARYTEASLVKMLESEGIGRPSTYASIISTIIDRGYVQMRGNALVPTFTAFAVTSLLEQ
YFGELVDPHFTARMEETLDHIAAGKSDSTPYLKEFYYGEKGVNTLVEEKQKEIDPDTAKA
VDLDENIDARIKIGYFGPYLETESEEGQVRASIPQDVTPADINPEQVEVLIRQKTEGPDQ
LGTHPETGEPIFIKIGKYGPYVELGEATEEKKKPKRCSIPKGTKAEDVTLEMAVDLLSLP
RHLGEHPATGAPIKAAIGPYGPYVVHDQGKEGKDYRSLKKEDDVLTVGLDRALELLSQPK
RTRRGNQKELIKELGNHPDNDKPVKLYKGQHGPYVNHGRKNASLPEGEKPENITLERAVE
LLAEKSKSTTTKTKSSSSSSKKASNSKTGTKSKTSKTKSSSNSSSKKTSSSKTGTKSKTS
KTKSSNSANKNSSSKTATKKGGTKSKSSTTNNK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcttgtcatcgttgaatcaccaactaaagcccgaaccatccgtaaatatctg
cccaatgattatcgcgtagaagcctccatgggccacgtgcgagacttaccctcctccgcg
aaagaagtgccagccaaaattaaaggggaaagttgggcgcgactgggggttaacgtagaa
aatggatttgaacctgtttatgttgttcccagtgacaagaaaaaagttgttaaggaactc
aaagccgccctcaaagaagccgatgaattaatcctcgccacagacgaagacagagaagga
gaaagcatttcttggcatcttaaagaattactcaacccaaaagttcctaccaagcggatg
gttttccatgaaattacccgtgaggcgattcaagaagcccttaaccaatgtcgggatgtc
aacgatgacttagtagaagcccaagaaactcggcgcattcttgatcgtctctatggctat
accctctctcccctactgtggaacaaaatcgcacggggactttccgcagggcgagtgcag
tcagtggcggtacgtctcattgtggaaaaagaaagagaacggcgggctttcaaaagtgga
agttattgggacttaaaagccaccctagaaaaagaaaaaagtgaatttgaagcgaaatta
attacccttggtgggaaaaaactcgccacaggtagtgactttgacccgaaaacggggaaa
attgctaaagggaaggatgtggtgctgctaaaagaagcagatgcgaatgcgctaaaagag
cgactaagtgataaagaatggacggttaaacaagttgaagaaaaacccactactcgcaag
ccatcaccgccgtttactacttccactctgcaacaagaagccaaccgcaaattaaaaatc
tcagcacgggataccatgcggacggctcagagtttgtatgaaaatggttatattacctat
atgcggactgactcggtgcatctgtctgaacaagccattagtgccgctagaagctgtgta
accagcaaatacggtaaagaatacctttccccaaaaccccgtcaatacagtaccaaaagt
aaaggcgcacaagaagcccacgaagcgatccgcccagctggagaaagtttccgttctccc
caagaaacagggctacaggggcgagaatttgccctctatgacttgatttggaagcgcaca
gttgcctcacaaatggcaaacgcgaagttaactcaaattagtgtcacccttactgtggaa
gatgcggagtttcgttctagtggtaaacgcattgactttcctggattctttcgggcatat
gtagagggatcagatgatccggaagcggctttagataaccaagaggtggttttaccgaac
ttaaaagaaggcgatcatcccaattgtaaaaaattagagtcccttggacatgaaacccaa
cccccagcccgttatacggaagcctcactggtgaaaatgctagaaagtgaaggaattggg
cgacccagtacctatgccagtattattagcacaattatcgatcgcggctatgtgcaaatg
cgtggtaatgcccttgttccaacttttaccgcctttgcagtcaccagtcttttagaacag
tattttggggaattggttgatcctcattttaccgcccgcatggaagaaacccttgatcac
atagcagccggaaaaagcgactctaccccctatctgaaagaattttattatggggaaaaa
ggagtcaataccctagtggaagaaaagcagaaagaaattgatcctgatacggctaaagcg
gttgatttagacgaaaacattgatgcgagaattaaaattggctattttggcccctatcta
gaaactgaaagtgaagaaggacaggtcagggcttctattccgcaagatgtgactcctgct
gatattaatcctgaacaagtagaggttctgattcgccagaaaacagaagggccagatcaa
ctgggaacgcatcctgaaacgggagaacccatctttatcaaaattggtaaatatggtcct
tatgtggaattaggagaagccactgaagagaagaaaaagccgaaacgctgttcgattcct
aaagggacaaaagccgaagatgtaacgttagaaatggcagtggatttactttcacttcct
cgtcatttaggcgaacatcctgcaacgggcgcacccatcaaagccgcgatcggaccatac
ggcccctatgttgtccatgatcaaggaaaagaggggaaagactatcgttctctaaagaaa
gaggatgatgtgttaacggtgggattagatcgcgctttagaactgctttcacaaccgaaa
agaactcgtcgcggcaaccaaaaagaattaattaaagaattaggaaatcaccctgataat
gataagcccgtgaaattatataaagggcaacatggcccttatgttaatcatggtcgaaaa
aatgccagtcttccagaaggagaaaagcctgagaatattaccctagaacgagcggtggaa
cttttagcagaaaaaagtaaaagtacaacaaccaagaccaaatctagtagttcgagttcc
aagaaagcgtctaacagtaaaactggaactaaaagtaaaacaagcaagaccaaatctagt
agcaattcgagttctaagaaaacgtctagcagtaaaactggaactaaaagtaaaacaagc
aagaccaaatctagtaacagtgccaacaaaaattccagcagtaaaacagctactaaaaaa
ggcggaactaagagtaaaagtagtaccacaaataacaaataa
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