Euhalothece natronophila: FRE64_08965
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Entry
FRE64_08965 CDS
T06117
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
enn
Euhalothece natronophila
Brite
KEGG Orthology (KO) [BR:
enn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enn03400
]
FRE64_08965 (sbcC)
DNA repair and recombination proteins [BR:
enn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FRE64_08965 (sbcC)
Archaeal homologous recombinant proteins
FRE64_08965 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_15
AAA_27
AAA_29
ABC_tran
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QDZ40058
UniProt:
A0A5B8NM27
LinkDB
All DBs
Position
complement(1868786..1871803)
Genome browser
AA seq
1005 aa
AA seq
DB search
MIPKQLTLSNFLSYQQATLDFTGLHTACICGANGAGKSSLLEAITWTLWGKTRTASDEDV
INTNGQEVQVDFRFQCNGETYRVIRKRRRGQSAGLELQVQQENGQFYSLTAKGVKATQQK
INDLLKLDYDTFINSAYLRQGRADEFMMRSPSERKKVLAELLKLDQYQTLSEQARDTAKT
FKGKVEQLEQNLTLTEEKIAEEKTTQTELDKINQDYQALQETQASDQSQLQHLKTLDSQR
QSKQEQLDWYQQQEEIITKDCRDLQEKQTQLQQTLSQLSELLNQEETINKAYQTYLQLQE
EEASLSKKFQTYQDLQQQRQQVKEDQQAVTNQLKLDVQRLETELENLASQEQSYQKTLQK
EEEIKEALSQLQAARKRLQELDKLQEEVSPLMQRRQTLQLEIERESSRKQARLEQLEANR
EELREKLAQVPAMKQEYQEIEERLAELNKKQNYSQRIQEKKQEKQATKERLQESEKTYQK
QLDELLKKLELLKNEEAVCPLCETPLDDDHKKRVTDKINHEHQSIAREKETIWEDLAKSQ
RELEKYHQEYEEITQELAVHDQLVARQAQVESQLDSTCDIHEEISNLNQEIKAIQESLEQ
QNYAQQWQAELQTIEQRLNEINYDEKSHAVARGEVERLRYAERKGEQLEEAKKELAKIGK
RKPELESNLEAKKQEIAKKESELSENLNQIDAEIEELGYARSRHNEILNSLRESQNSQIQ
YQELQRAKADYPQREQELNETQKRLEKRQKEKQDYQQQKETLRQEMANIQDVRDQIKQLE
TKTQQQRQKLDSYLSKKGKLEEKLSYLQDLKSKYEASKEQLQTLKRKHTIYNELSQAFGK
NGIQALMIENILPQLEAQTNYILSRLTGNQLHVQFLTQKASKGRSKKQTKLIDTLDIIIA
DTQGTRAYETYSGGEGFRINFAIRLALAKLLAQRAGTALQLLIIDEGFGTQDSEGCERLI
AAINAIAPDFCCILAVTHMPQFKEAFQHRIEVTKTMEGSQLTLTS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaacaactcactctctccaactttctcagctatcaacaagcaacccttgat
tttactggacttcatactgcttgtatttgtggtgccaatggtgctgggaaatcatcactt
ttagaagcaattacttggacattatggggaaaaactcgcactgcttctgatgaagatgtg
attaatacgaatggtcaagaagtacaagtagattttcggtttcaatgtaatggcgaaact
tatcgcgtaataaggaaacggcgacgaggacaaagtgcgggtttagaattacaggtgcaa
caagaaaatggtcagttttattccttgacagctaaaggagtaaaagctactcaacagaaa
attaatgatttactaaaattagattacgatacttttatcaattctgcttatttacgtcaa
ggacgtgctgatgagtttatgatgcgttctcctagcgaacggaaaaaagttttagcagaa
ctcttaaaattagatcaatatcaaacgctatctgaacaagcaagggatacggctaaaacc
tttaaaggaaaagtagaacagttagaacaaaatttaacactgactgaggaaaaaattgca
gaagaaaaaacaacccagacagaattagacaaaattaatcaagactatcaagcgttacag
gaaactcaagcctctgatcaatctcagcttcagcatctcaaaactttagactcccaacga
caaagcaagcaagaacaactcgactggtatcaacaacaagaagaaattattactaaagac
tgtcgtgatcttcaagaaaagcaaacacagcttcagcaaactctttctcagttaagtgaa
ctattaaaccaagaagaaactattaataaagcctatcaaacttatttacaactacaagaa
gaagaagcgagtctttctaagaaatttcaaacttatcaagatttacaacagcaacgtcaa
caagttaaagaagatcagcaagcagttactaatcagttaaagttagatgttcaacgttta
gaaaccgaattagaaaacttagcaagccaagagcaatcttatcaaaaaacgctacaaaaa
gaagaagagattaaggaagccctcagtcaactccaagcggcgcggaaacgattgcaagaa
ctggataagttacaagaagaagtgtctcccctcatgcagcgccgtcaaaccttgcaatta
gaaattgaacgggaatcgtctcgcaaacaagcccgtttagaacaattagaagcaaatcga
gaggaattaagagaaaaactagctcaagttcctgcgatgaaacaagagtatcaggagatt
gaggaaagattagcggaattaaataaaaaacagaattattctcaacggattcaagagaaa
aaacaagagaaacaggcaactaaggaaagattacaagaaagtgaaaaaacatatcaaaaa
cagcttgatgaattgcttaaaaaattagaactgcttaaaaatgaggaagcagtttgtccg
ttgtgtgaaacccctttagatgacgatcataaaaaacgggttactgataaaattaatcat
gaacatcagtcaattgcaagggaaaaggaaacaatttgggaagatttagcgaaatctcag
cgagagttagaaaagtatcatcaagagtacgaggaaattacccaagaattagccgttcat
gatcagttagtggcaagacaagcccaagtagagtcacagctagatagcacttgtgatatt
catgaagaaatctcaaatttaaatcaagaaattaaagcaattcaagagagtttagaacag
caaaattatgctcaacaatggcaagcggaattacaaactatagaacagcgacttaatgag
atcaattatgatgaaaaaagtcatgctgtagcaagaggagaggtggaacgcttacggtat
gctgaacggaaaggggaacagttagaagaggcaaaaaaggagttagctaaaattggaaaa
cgcaaaccagagttagaaagtaatctggaggctaaaaaacaagaaattgctaaaaaagaa
tcggaattaagtgaaaatttaaaccaaattgatgcagaaatagaagaattaggctatgcg
cgatcgcgccataatgaaatactcaattctttaagagaatcccaaaatagccaaatccaa
tatcaagaattgcaacgagcaaaagctgactatcctcaacgagaacaagaactcaatgaa
actcaaaaacgtcttgaaaaacgacaaaaagaaaaacaagactatcagcaacaaaaagaa
actttacgccaagaaatggcaaatattcaagatgttcgtgatcaaattaaacaattagaa
actaaaactcagcaacaacgccaaaaacttgattcctatctttccaaaaaagggaagcta
gaggaaaaactaagctatctccaagacttaaaaagcaaatatgaagcctcaaaagagcaa
ttacaaactctcaaacgcaaacatacgatttataacgaactttcccaagcctttggaaaa
aatggcattcaagccctgatgattgaaaacatcttaccgcaactagaagcgcaaaccaat
tacatcttaagtcgtctgacggggaatcaacttcatgtgcagtttttaactcaaaaagca
agtaaagggcgatctaagaagcaaactaaattaattgatacccttgatattattattgct
gatactcaaggaacaagggcttatgaaacttattcagggggtgagggatttcggattaat
tttgccattcggttagctttagcgaaactattagcccaacgcgctggaactgccttacaa
ttactaattatagatgaaggatttgggacacaagatagcgaaggatgtgaacgtttaatt
gccgctattaacgcgatcgcgcctgatttttgttgtattctagcagttacccatatgcct
caatttaaagaagccttccaacaccgcattgaagttactaaaactatggaaggatcacag
cttaccttaacctcttaa
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