Euhalothece natronophila: FRE64_10785
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Entry
FRE64_10785 CDS
T06117
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
enn
Euhalothece natronophila
Pathway
enn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FRE64_10785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enn03021
]
FRE64_10785
03400 DNA repair and recombination proteins [BR:
enn03400
]
FRE64_10785
Enzymes [BR:
enn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FRE64_10785
Transcription machinery [BR:
enn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FRE64_10785
DNA repair and recombination proteins [BR:
enn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FRE64_10785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QDZ40398
UniProt:
A0A5B8NN00
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All DBs
Position
2213585..2215477
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AA seq
630 aa
AA seq
DB search
MVQNNEQKFDYVKISIASPDRIREWGERNLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAAVTHVWYLKG
IPSYLSILLDMPLRDVEQIVYFNSYVVLEPGNAGNLSYKQLLSEEQWLEIEDQLFAEDTE
LMGVEVGIGAEAIQRLLQDLNLQEEAEKLREEISGSKGQKRAKLIKRLRVVDHFIATGAS
PDWMILSYIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLKMHQCGLPREMAIELFQPFVIHRLIRNNVVSNIKSAKKKIQQSDPAVWEVLE
EVIAGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LEAQSEARLLMLASHNILSPATGTPIVVPSQDMVLGSYYLTADDPSVPSQDKQYYANLED
VLRAYEHGYLDLHAYIWVRFEGKVEDPTEAEPVEEETREDGTVTKLYPNRRVRETASGEI
ITQYVRTTPGRVIYNKTVQDALLGNTWANA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaataacgaacagaaatttgactacgttaaaattagcatcgcttctccagat
cggattcgggaatggggagaacgcaaccttcccaatggtcaagttgtaggagaagtaacc
aagcctgagacaattaattatcgcaccttaaagcctgaaatggatgggctattttgtgag
cgtatctttggtccggcaaaagattgggaatgtcattgtggcaaatataaacgagtacgc
catcgtggcattgtctgtgaacgctgtggagtagaagtcactgaatctcgagtccgtcgt
catcgcatggggtatattaagctggcagctgctgtcactcatgtgtggtacctcaaagga
attcccagttatttgagtattcttttagatatgccgctacgtgatgtagagcaaattgtc
tattttaattcctatgtggtgttagaaccgggcaatgctggaaatttaagttataagcaa
ttactcagcgaggaacagtggttagaaattgaagaccaactgtttgcagaagatacggaa
ttaatgggagttgaagtaggaattggggcggaagccatccaacgactcttacaagacctc
aatttacaagaagaagcagagaagctcagagaagaaatttctgggtcaaaagggcaaaaa
cgagctaagctcattaaacgcttacgagtagtggatcactttattgccactggggcttct
cccgattggatgattttaagttatatcccagtgattcctccagacttgcgtccgatggtg
cagttagatggcggacgctttgccacttctgacttaaatgatctgtatcgacgggtaatt
aatcggaataatcgtctcgctcgcttacaagaaattcttgcccctgaaattattgtccgt
aatgaaaaacggatgttacaagaggcagtagatgccttaattgataatggtcgtcgtggt
cgaactgttgtcggagccaacaaccgccccttaaaatctctctcagatattattgaagga
aaacaagggcgttttcgacaaaaccttttaggaaaacgagtagattattcgggacgttcg
gtaattgtagttggccccaacctcaaaatgcatcaatgtggcttaccgcgagaaatggca
attgagctatttcagccttttgtcattcaccgcttaattcggaataatgtggtaagcaat
attaaatcggcaaaaaagaaaattcaacaaagtgaccctgccgtgtgggaagttctagaa
gaagtcattgctggacacccagtgatgttaaaccgcgctcccacgctccaccgtttaggg
attcaagcctttgaaccaattttagtagaagggcgagccattcaattacatcctttagtt
tgccctgcttttaacgctgactttgatggtgaccaaatggcagttcacgttcccctctct
ctagaagcccaatcagaagcacgactcctgatgctagcgagtcataatattctgtctcct
gcaacgggaacaccaattgttgtgccttctcaggatatggtattagggtcttattattta
actgccgatgatccatcagtcccctctcaagataagcaatattatgccaacttagaggat
gtgttgcgagcttatgaacatggctatcttgaccttcatgcctacatttgggttcgtttt
gaaggaaaggtggaagatcccacagaagctgagccggtggaagaagaaacccgcgaggat
ggaaccgtgactaaactgtatcccaatcgtcgggttcgagaaacagcatcgggagagata
attactcagtatgttcgcaccactccagggcgagttatctataacaaaactgttcaggat
gcgttattaggtaatacctgggcaaatgcttag
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