Ensifer sp. PDNC004: JVX98_01205
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Entry
JVX98_01205 CDS
T09472
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JVX98_01205 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enp03400
]
JVX98_01205 (xth)
Enzymes [BR:
enp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JVX98_01205 (xth)
DNA repair and recombination proteins [BR:
enp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JVX98_01205 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
QRY65745
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All DBs
Position
unnamed_1:complement(262692..263465)
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AA seq
257 aa
AA seq
DB search
MKIASFNINGINRRLDNLIAWLGEAEPDIVCLQELKATDRQFPRSAIEAAGYGAVWQGQS
AWNGVAILSRGSEPVLTRVGLDHDPSDAEARYIEAAVSGLLVACLYAPNGNPRPGPKFVY
KLGWHERFAKHAAELYALDLPVVLAGDYNIVPEPRDIYPTTSYDDNALVQPESRAAFRDL
LDQGWLDALRKKHPKEKLFTFWDYRRNRWQRDAGLRLDHMLLSRKLSRKLTGAGIDREVR
GMEGASDHAPVWITLRD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccagcttcaacatcaacggcatcaacaggcggctcgataacctgatcgcc
tggctgggcgaggcggagccggacatcgtttgcctgcaggagttgaaggcgaccgatcgg
cagttcccacgctcggcgatcgaggcggccggttatggcgcggtctggcagggacaatcc
gcatggaacggtgtggcgatcctctcccgcggcagcgagccggtgctgacccgtgtcggg
ctcgaccatgacccgtcggatgccgaggcgcgttatatcgaggctgcggtcagcggcctc
ctggtcgcctgtctctacgcgcccaacggcaacccgcggccaggcccgaagttcgtctac
aagcttggctggcacgagcgttttgccaagcatgcggccgagctctacgcgctcgatctg
cctgtcgtgcttgccggcgactacaacatcgttccggagccgcgcgacatctacccgacg
acctcctatgacgacaacgcgttggtccagccggaaagccgcgccgcattccgcgacctt
ctcgatcagggctggctcgacgccttgcgcaaaaaacacccgaaagaaaagcttttcacc
ttctgggactatcgccggaaccgttggcagcgcgacgcggggcttcggctcgatcatatg
ctcctcagccggaagctttcccgtaagctgaccggcgccggcatcgaccgcgaggttcgt
ggcatggagggcgcgagcgatcatgcgccggtgtggatcaccctccgcgattga
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