Ensifer sp. PDNC004: JVX98_03795
Help
Entry
JVX98_03795 CDS
T09472
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03420
Nucleotide excision repair
enp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JVX98_03795
03430 Mismatch repair
JVX98_03795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enp03400
]
JVX98_03795
Enzymes [BR:
enp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JVX98_03795
DNA repair and recombination proteins [BR:
enp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JVX98_03795
MMR (mismatch excision repair)
Other MMR factors
JVX98_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
HHH_5
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QRY66300
LinkDB
All DBs
Position
unnamed_1:862755..864824
Genome browser
AA seq
689 aa
AA seq
DB search
MSAAYLEKLNDRQREAVEHGIGLPEGQVGGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAAAEMTRRVARICRQVLGDNAAVMTDALSWAGTFHGIGARILRIYAEQI
GLGPDFTIHDREDSADLMNLVRHELGFSKMESRFPTKGTCLSIYSRVVNSESSIGDVLKT
AYPWVTGWDEQLKALFAAYVDAKQAQNVLDYDDLLLYWAQMVSDPELADDVGGRFDHVLV
DEYQDTNRLQASILMALRPGGHGLTVVGDDAQSIYSFRAATVRNILDFPNAFSPEPADVI
TLDRNYRSTQPILAAANGVIGLARERFTKNLWTDRQSEQRPLLVAVKDEADQAAYIVEQV
LAGREIGIALKQQAVLFRSSNHSGTLEVELTRRNIPFVKFGGLKFLDSAHVKDLLAVLRF
AQNPRDRVAGFRLLQMLPGIGPQTAGKILDAIAADPEPLAALAEIPPPAKTGENWTGFVD
LVSGLRRAEPGWPQEIGAARAWYEPHLDRIHEDADTRKADLLQLEQIAGGYQNRERFLTE
LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLGVGTTAE
LEEERRLLYVGMTRARDHLSLVTPQRFFTHGQNAQGDRHVYASRTRFIPATLLQFFETSS
WPKISASASERSAKQIRIDVGARMRSMWK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcctatctggaaaaactcaatgaccgccagcgcgaagcggtcgagcacggt
atcggcttgccggaaggacaggtcggcggcccgcttctcatcatcgccggcgccggctcc
ggcaagacgaatacgctggcccatcgggtcgcgcatctcatcgtcaacggggctgatccg
cgtcgcattctcctgatgaccttctctcggcgcgcagcagccgagatgacccgccgggtc
gcgcgcatctgccgccaggttcttggcgacaatgccgcagtcatgacggacgcgctttcc
tgggccggcaccttccatggcatcggcgcccggatcctgcgcatctatgccgaacaaatc
ggtctcggcccggattttacgatccatgaccgggaagacagcgccgacctgatgaacctc
gtgcgccacgagctcggcttctcgaagatggaaagccggttcccgaccaagggaacgtgc
ctttcgatctattcgcgcgtcgtgaactccgaaagctcgattggcgacgtgctgaagacg
gcctatccctgggtcaccggctgggacgaacagctcaaggcgctgtttgcggcctacgtc
gatgccaaacaggcgcagaacgtgctcgattacgacgatctcctgctctactgggcgcag
atggtttccgatccggagcttgccgacgatgtcggcggacgcttcgatcatgttcttgtc
gacgagtatcaggacaccaacaggctgcaggcctcgatcctgatggcgctcagacccggg
ggccacggattgacggtcgtaggcgacgacgcccagtcgatctattccttccgggctgca
acggttcgcaacattctcgatttcccgaacgccttttcgcccgagcccgccgacgtcatc
accctcgaccggaattaccgctcgacgcaaccgatcctcgctgccgcaaacggcgtgatc
ggcctggcgcgggagcggtttaccaagaacctctggacggacaggcaatcggagcaacga
ccgttgctcgtcgccgtcaaggacgaagcggatcaggcggcctatatcgtggagcaggtt
ctcgctggccgtgagatcggcatcgccttgaagcagcaggcggttctattccgctcgtcc
aaccacagcggaacgctcgaagtcgaactcacccggcgcaacattccgttcgtgaagttc
ggtggcctgaagtttctcgacagcgcccatgtgaaggacctgctcgcagtcctgcgcttt
gcgcagaacccgcgtgaccgcgtcgccggtttccggttgctgcagatgctacccggcatt
ggcccgcagaccgccggaaagatcctcgatgcgatcgccgccgatccggaaccgctcgca
gcccttgcggagatcccacctcccgccaagaccggcgagaactggaccggcttcgtcgat
ctggtgtccggcctgcgacgggccgagcctggatggccgcaggagattggcgctgcgcgc
gcctggtatgagccccatctcgaccggatccatgaagacgccgatacccgcaaggccgac
ttgctgcagctcgagcagattgccggcggctaccagaaccgcgaacgtttcctgaccgag
ctgaccctggacccgcccgatgccaccagcgaccaggcgggcgtgccgctgctcgacgag
gactatctgatcctgtcgaccatccattcggcgaagggtcaggaatggcgctcggtcttc
atgctcaacgtcgtcgacggctgcattccgtccgatctcggggtcggcacgaccgccgaa
ctcgaagaggaacggcggctgctctatgtcggcatgacacgggcacgcgatcatctgtcc
ctggtgacgccgcagcgcttcttcacccacggtcagaatgcccagggcgaccggcatgtc
tacgcctcgcgaacccgctttatcccagcgacattgctgcaattcttcgagacgagcagt
tggccgaagatttcggcaagcgccagcgagcgaagcgccaagcagatccgcatcgacgtc
ggcgcccgcatgcgctccatgtggaagtga
DBGET
integrated database retrieval system
