KEGG   Ensifer sp. PDNC004: JVX98_08930
Entry
JVX98_08930       CDS       T09472                                 
Name
(GenBank) UvrD-helicase domain-containing protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
enp  Ensifer sp. PDNC004
Pathway
enp03420  Nucleotide excision repair
enp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:enp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    JVX98_08930
   03430 Mismatch repair
    JVX98_08930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:enp03400]
    JVX98_08930
Enzymes [BR:enp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JVX98_08930
DNA repair and recombination proteins [BR:enp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JVX98_08930
   MMR (mismatch excision repair)
    Other MMR factors
     JVX98_08930
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 PcrA_UvrD_tudor AAA_11
Other DBs
NCBI-ProteinID: QRY70132
LinkDB
Position
complement(220406..222871)
AA seq 821 aa
MMSGFDDIPFFDEEPAPRKQQPAPAGVPATGGIAARAMAARDRAQPRPDYLQGLNPEQAE
AVETLDGPVLVLAGAGTGKTRVLTTRIAHILTTGRAFPSQMLAVTFTNKAAREMKERIGV
LVGHAVEGMPWLGTFHSIGVKLLRRHAELVGLRSDFTILDTDDVVRLIKQLIQAEGIDDK
RWPAKQFAGLIDGWKNKGLDPAQIPEGDARAFANGKGRELYAAYQNRLLTLNACDFGDLL
LHPIRIFRMHADVLKDYHDKFRYILVDEYQDTNTAQYMWLRLLAQRPKGVPQNVCCVGDD
DQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKTLF
TDRTDPDDEKVQVHAAWDSEEEARAVGEEIEQLQRKGHKLNDMAILVRASFQMREFEDRF
VTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTVRTLH
DYARARDIPMLAAASEIIETDELKPKARKALFDVVTDFRRWQSLLETTVHTELAEQILDE
SGYTAMWQNDKTAEAPGRLENLKELIRSMEAFESLRGFLEHVALVMDAEQNENLDAVSIM
TLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKHRCHIWFV
SNRRIHGLWQSTMPSRFLEELPLAHVDVAENEQSYGGYGRGGYGQSRFDKADPFQNNYST
PGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRGRTIDGELVAKSTATEPSRFSVG
DRVFHMKFGNGNIAAIEGNKLTIDFDRAGQKRVLDGFVEKA
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgatgagtggtttcgacgacattcccttcttcgacgaggagccggcgccgcgcaagcag
cagcccgcccccgcaggtgttccggcaactggcggcattgctgcgcgcgccatggcggcg
cgcgatcgcgcccagccgcgcccggattatctccaaggcctcaacccggaacaggccgaa
gccgtcgagacgctggatggtccagtccttgtgcttgcgggcgccggcaccggcaagacc
cgggtgctgacgacgcgcatcgcccatatcctgacgaccggccgcgccttcccctcgcag
atgctcgcggtgaccttcaccaacaaggcggcgcgcgagatgaaggagcgcatcggcgtg
ctcgtcggccatgcggtcgaaggcatgccctggctcggcaccttccactcgatcggcgtc
aagctcctgcgccgccatgccgaactcgtcggcctgcgctccgatttcaccattctcgac
accgacgacgtggtgcggttgatcaagcagctgatccaggccgaaggcatcgacgacaag
cgctggcccgccaagcagttcgccggcctgatcgacggctggaagaacaaggggctcgat
cccgcccagatccccgagggcgacgcccgcgcctttgccaacggcaagggccgcgagctt
tacgccgcctatcagaaccggctgttgacgctgaacgcctgcgacttcggcgatcttctg
ctgcacccgatccgcatcttccgcatgcacgcggacgtgctgaaggactatcacgacaag
ttccgctacatcctcgtcgacgagtaccaggacaccaacacggcccagtacatgtggctg
cggctgctcgcccagcggccgaagggcgtcccgcagaacgtctgctgtgtcggcgacgac
gaccagtcgatctatggctggcgcggcgcggaggtggacaacatcctgcgcttcgagaag
gatttcccgggcgccaaggtgatcaagctcgagcgcaactatcgctcgaccgaacatatt
ctgggcgccgccggtcacctgatcgcccacaacgagggccggctcggcaagacgctcttc
accgaccgcaccgatccggatgacgagaaggtgcaggtgcacgcggcctgggattccgaa
gaggaagcccgcgccgtcggcgaggaaatcgagcagctgcagcgcaagggccacaagctc
aacgacatggcgatcctggtgcgcgcctccttccagatgcgcgagttcgaagaccgcttc
gtcacgcttggcctcaactaccgcgtcatcggcggcccgcgcttctacgaacgcctcgaa
atccgcgatgccatggcctatttccgcctggtctgccaaccggccgacgatctcgccttc
gagcgcatcgtcaacacgccgaagcgcggccttggcgacaccaccgtgcgcaccctgcac
gactatgcccgcgcccgcgacattccgatgctggcggccgcttcagagatcatcgagacc
gacgagctgaagccgaaggcgcgcaaagccctgttcgacgtcgtcaccgacttccgccgc
tggcagagcctgcttgaaacaaccgtgcataccgagcttgccgagcagatcctcgacgag
agcggctatacggcgatgtggcagaacgacaagacggccgaagcccccggcaggctcgaa
aacctgaaggaactgatccgctcgatggaagcgttcgagagcctgcgcggcttcctcgaa
cacgtggcgctggtcatggatgccgagcagaacgagaacctcgacgccgtctcgatcatg
acgctgcactcggccaagggcctggagttcgacaccgtcttcctgccgggctgggaggaa
ggcctgtttccgcaccagcgcgcgcttgacgaaggcggccgctcgggcctcgaggaagaa
cgccgccttgcctatgtcggcatcacccgcgccaagcatcgctgccacatctggttcgtc
tccaaccgccgcatccacggcctctggcagtcgaccatgccgtcacgcttcctcgaggag
ctgccgcttgcccatgtggacgttgccgaaaacgaacagtcctatggcggctacggtcgc
ggcggctacggccagtcgcgcttcgacaaggccgaccccttccagaacaactattcgacc
cccggctggaagcgcgcgcagcaaaaccgttccgacgccacccgcgacaactggggcacc
cgctccgggcacgcggtcgagcgcatcggctacggcgaaagcggcccgcgcggccgcacc
atcgacggcgagctggtggcgaaatcgacagctaccgaaccctcgcgcttctcggtcggc
gaccgcgtcttccacatgaagttcggcaacggcaacatcgccgccatcgaaggcaacaag
ctcaccatcgacttcgaccgcgccggccagaagcgtgtgctggacgggtttgtcgagaag
gcgtga

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