Ensifer sp. PDNC004: JVX98_18350
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Entry
JVX98_18350 CDS
T09472
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JVX98_18350 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enp03019
]
JVX98_18350 (groL)
03110 Chaperones and folding catalysts [BR:
enp03110
]
JVX98_18350 (groL)
03029 Mitochondrial biogenesis [BR:
enp03029
]
JVX98_18350 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
enp04147
]
JVX98_18350 (groL)
Enzymes [BR:
enp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JVX98_18350 (groL)
Messenger RNA biogenesis [BR:
enp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JVX98_18350 (groL)
Chaperones and folding catalysts [BR:
enp03110
]
Heat shock proteins
HSP60 / Chaperonin
JVX98_18350 (groL)
Mitochondrial biogenesis [BR:
enp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JVX98_18350 (groL)
Exosome [BR:
enp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JVX98_18350 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JVX98_18350 (groL)
Exosomal proteins of breast cancer cells
JVX98_18350 (groL)
Exosomal proteins of colorectal cancer cells
JVX98_18350 (groL)
Exosomal proteins of bladder cancer cells
JVX98_18350 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8753
Motif
Other DBs
NCBI-ProteinID:
QRY70117
LinkDB
All DBs
Position
2074514..2076154
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVGEVVKDLQAKAKKINTSEEVAQVGTISANGERQIGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLDDVFVLLHEKKLSNLQAMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTLDMLGRAKKVSISKENTTIVDGSGQKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITVKGVNDDQEAGINIVRRALQAPARQIAENAGDEASIVVGKILDKDQDNFGYNA
QTGEYGDMIAMGIIDPVKVVRTALQDAASVAGLLVTTEAMIAELPKKDAPAGMPGGMGGM
GGMDMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagaaatcaagttcggccgcaccgcgcgcgaaaagatgctgcgtggcgtc
gacatcctcgctgacgccgtaaaggtcacgctcggcccgaagggtcgtaacgtcatcatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtatcggtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagttgcttcgaag
accaacgacatcgccggcgacggcaccacgactgcaaccgttctggcccaggcgatcgtt
cgcgaaggcgccaaggctgttgctgccggcatgaacccgatggacctgaagcgcggtatc
gacctcgctgtcggcgaagtcgtcaaggatctccaggccaaggccaagaagatcaacact
tcggaagaagttgcacaggtcggcacgatctcggctaacggcgagcgtcagatcggcctc
gacattgctgaagcaatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtcaccaacccggaaaagatggtcgctgacctcgacgacgtcttcgtt
ctcctccacgagaagaagctctcgaacctgcaggccatgctcccggttctcgaagctgtc
gttcagaccggcaagccgctgctcatcatcgctgaagacgtcgaaggcgaagctcttgct
acgctcgtcgttaacaagctgcgtggcggcctcaagatcgctgctgtcaaggctccgggc
ttcggcgatcgccgcaaggccatgctcgaagacatcgccatcctgaccggtggtaccgtg
atctcggaagacctcggcatcaagctcgaaaacgtcacgctcgacatgctcggccgtgcg
aagaaggtttcgatctccaaggaaaacacgacgatcgtcgacggttccggccagaagagc
gacatcgaaggccgcgttgcccagatcaaggctcagatcgaagaaaccacttctgactac
gaccgcgaaaagctgcaggaacgtcttgccaagctcgctggcggcgttgccgtgatccgc
gttggcggctcgacggaagttgaagtcaaggaaaagaaggaccgcatcgacgacgctctc
aacgcgacgcgcgctgctgttcaggaaggcatcgtaccgggcggcggcgttgccctgctg
cgttcttccgtcaagatcaccgtcaagggtgtcaacgacgaccaggaagccggcatcaac
atcgttcgtcgcgctctgcaggctccggcccgccagatcgcagagaacgctggtgacgaa
gcttcgatcgttgtcggcaagatcctcgacaaggaccaggacaacttcggctacaacgcc
cagaccggcgaatacggcgacatgattgccatgggcatcatcgacccggtcaaggtcgtt
cgcaccgcccttcaggacgcagcttcggttgctggcctcctcgtcacgacggaagccatg
attgccgaactgccgaagaaggacgccccggctggcatgcctggcggcatgggcggcatg
ggcggcatggacatgatgtga
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