Ensifer sp. PDNC004: JVX98_20580
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Entry
JVX98_20580 CDS
T09472
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JVX98_20580 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enp03400
]
JVX98_20580 (mutM)
Enzymes [BR:
enp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JVX98_20580 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JVX98_20580 (mutM)
DNA repair and recombination proteins [BR:
enp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JVX98_20580 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QRY66776
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All DBs
Position
complement(2542452..2543342)
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AA seq
296 aa
AA seq
DB search
MPELPEVETVKRGLAPTMEGALLVNAELRRPDLRFPFPENFSSTVAGQRIVSLSRRAKYL
MIDLEAGDVIIAHLGMSGSFRIEVGPAAATPGEFHHPRGKDEKHDHVIFHLDGAQGPLRV
IYNDPRRFGFMDLARRDTVANHAYFRALGEEPTGNVLDAAYLAARFAGKAQPLKAALLDQ
KNIAGLGNIYVCEALWRSHLSPLKPAGALVDKRGKPKDGLVRLTDAIREVIADAIAAGGS
SLKDHIQADGSLGYFQHSFSVYDREGEACRTTGCDGTVARIVQAGRSTFYCPHCQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcccgaggtcgaaaccgtcaagcgcggcctggcgccgaccatggagggg
gcgctgctggtcaatgcggaactgcgccgtccggatctgcgatttcctttcccggagaat
ttctcctcgaccgttgccggccagcgcatcgtctcgctgtcgcgccgcgccaagtacctg
atgatcgatctggaagccggcgacgtgatcatcgcccacctcggcatgtccggctccttc
cgcatcgaggtgggaccggcggccgcaacgccgggcgaattccaccatccgcgcggcaag
gacgaaaagcacgatcacgtcattttccatctcgacggcgcgcaaggcccgctgcgggtg
atctacaacgacccgcgccgcttcggcttcatggaccttgctcgccgcgacacggtggca
aaccacgcctattttcgcgcgctcggcgaggagccgaccggaaacgtgctcgatgccgcc
tatctcgccgcacgctttgccggcaaggcgcagccgctgaaggcggccttgctcgaccag
aagaacatcgccggtctcggcaacatctatgtctgcgaggcgttgtggcgctcgcacctg
tcgccgctgaaaccggccggcgcgctcgtcgacaagcgcggcaagccgaaggacgggctt
gtgcgcttgacggacgcgatccgcgaggtcatcgccgatgccattgccgccggcggatcg
tcgctcaaggaccatatccaggccgacggctcgctcggctacttccagcactccttctcc
gtctacgaccgcgaaggagaggcttgccgcacgaccggctgcgacggtacggtcgcgcgg
atcgtgcaggcgggccgctcgaccttctattgcccgcactgccagaaatga
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