Ensifer sp. PDNC004: JVX98_21055
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Entry
JVX98_21055 CDS
T09472
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JVX98_21055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enp03400
]
JVX98_21055
Enzymes [BR:
enp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JVX98_21055
DNA repair and recombination proteins [BR:
enp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JVX98_21055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QRY66863
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Position
complement(2630359..2631963)
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AA seq
534 aa
AA seq
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MASFFDNDSPSNLTEYSVSELSGSIKRTVEQAFDQVRVRGEISGYRGPHSSGHAYFALKD
DRARIDAVIWKGTFSRLRFRPEEGMEVIATGKVTTFPGSSKYQIVIETMEPAGAGALMAL
LEERKRKLAAEGLFDANRKRPLPYMPKVIGVVTSPTGAVIRDILHRIADRFPVHVVVWPV
RVQGDGSGDEVAAAIRGFNAVEPGGPIARPDVLIVARGGGSLEDLWGFNDEAVVRAAAAS
EIPLISAVGHETDWTLIDYAADQRAPTPTGAAEMAVPVRADLEAGLSGLSARLKSAVGRQ
MDNRRQSVRALARALPSLDQLLALPRRRFDEAALGLGRGLTMNTANKRRQFERASAELRA
DLLKGKLSERRQRLVDAMNKADRIVERQVHRGEARVSAADAALRALPSRLIGQIHRASDR
VAGLAARSDAAVRADVRRLRSVIVAQDRILQSLSYRNVLQRGFALVRDAEGGPVRQAASV
SVGMTLSLEFADGRVSAIAGEGEGEPASPPTAPRKKQTKPAEAAGDPPKQGNLF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcctctttcttcgacaacgattctccgagcaacctcaccgaatattcggtgtccgag
ctttcgggctcgatcaagcgaacggtcgaacaggccttcgaccaggtgcgcgtgcgcggc
gagatctcgggctatcgcggcccgcattcctcgggccacgcctatttcgcgctcaaggac
gaccgcgcgcgcatcgacgcggtgatctggaagggtaccttttcgcggctgcgcttccgt
ccggaagagggcatggaggtgatcgcgaccggcaaggtcacgaccttccccggctcgtcg
aagtatcagatcgtcatcgagacgatggagccggccggagccggcgcgctgatggcgctg
ctcgaagagcgcaagcgcaagctcgccgccgaagggctgttcgacgccaatcgcaagagg
ccgttgccctatatgcccaaggtgatcggcgtcgtgacgtctccgaccggcgccgtcatc
cgcgatatcctgcaccgcattgccgatcgctttcccgtccatgtcgtcgtctggccggtt
cgggtgcagggcgatggctcgggtgacgaggtggcagcggcgatccgcggcttcaacgcg
gtcgagcccggcgggccgattgcgcggccggatgtgctgatcgttgcgcgtggtggcggt
agcctcgaagacctctggggcttcaacgacgaggccgtcgtgcgcgcagccgccgcctcc
gagatcccattgatttctgccgtcggccacgagaccgactggacgctgatcgactatgcc
gcggaccagcgcgcgccgacgccgacgggtgctgccgaaatggcagtgccggtcagggcc
gatctcgaagccggtctctctggcctgtcggcccgcctcaagtcggccgtcggccgccag
atggacaatcgccgccagtcggtgcgggcgctcgcacgggcgctgccgtcgctcgaccag
ttgctggcgttgccgcgccgccgcttcgacgaggccgccctcgggctcgggcgcggcctc
acgatgaacacagccaacaagcggcgccagttcgagcgcgcctcggccgagttgcgtgcc
gatcttctcaagggcaagctttccgagcgccgccagcgcctggtcgacgccatgaacaag
gccgaccgcatcgtcgagcggcaagtacatcgcggcgaggcgcgggtttcggcggccgac
gctgcactgcgcgccttgccttcgcgcctcatcggccagatccatcgcgcatccgatcgc
gtggccggccttgcggcccggtccgatgcggccgtgcgcgccgacgtccgccgcctgcgc
agcgtcatcgtcgcccaggaccgcatcctgcagtcgctttcctatcgcaacgtcctgcag
cgcggctttgcgctggtgcgtgacgccgaaggcgggccggtgcgccaggctgcatccgtc
tcggttggcatgacgctcagcctggagttcgccgacggtcgcgtttcggcgattgccggc
gaaggcgagggcgagccggcttccccgccgacggcgccgcgcaagaagcagacaaaacct
gcagaggcggcgggggacccgccgaaacagggcaacctgttctag
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