Ensifer sp. PDNC004: JVX98_21500
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Entry
JVX98_21500 CDS
T09472
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
enp
Ensifer sp. PDNC004
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enp03016
]
JVX98_21500 (truB)
Enzymes [BR:
enp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JVX98_21500 (truB)
Transfer RNA biogenesis [BR:
enp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JVX98_21500 (truB)
Prokaryotic type
JVX98_21500 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QRY66941
LinkDB
All DBs
Position
complement(2713183..2714118)
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AA seq
311 aa
AA seq
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MSKPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGEVTHSSAERPNEEAIRALLPKYTGVI
SQVPPQFSAIKIDGERAYDLARDGETVEIPAREVEVHRLTLLGAAPNLAHFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEEDMVPLADLVALEKIEDDQERLAALDAYL
IETGEALSSLPHVPVNDDQAHRLRMGNPIILRGRDAPLATPEAYATARGKLVAIGEIAEG
EFRPKRVFAGS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgtaagcccaagggccgcccgatctcgggctggctgatcctcgacaag
ccgctcgacttcggctccaccgaagccgtctcgaagatcaagtggctgttcaaggcccag
aaggccggccacgccggcaccctcgatccgctcgcctccggcatgctgccgattgcgctc
ggcgatgcgacgaagaccgtcccttacgtgatggatggacgcaagatctacgaattcacc
gtcgcctggggcgaggagcgctccacggacgacctcgaaggcgaggtcacccattcctcg
gccgagcggccgaacgaagaggcgatccgcgcgcttctgccgaaatacacaggcgtcatc
agccaggtcccgccgcagttctcggcgatcaagatcgatggcgagcgcgcctatgatctc
gcccgcgacggcgagacggtcgaaatcccggcccgtgaggtcgaggtacaccggctgacg
ctgctgggtgctgcacccaatctcgcccatttcgaaatcgaatgcggcaagggcacctat
gtgcgctcgctcgcccgcgacatgggccgcgatctcgggtgtttcggccacatcgcgtcg
ctgcgacgtaccttcgtcgcccctttcggggaagaggacatggtgccgcttgccgacctg
gtggctttggaaaagatcgaggacgaccaggaacgtctggcggcactcgacgcctatctg
atcgagaccggcgaagcgctttccagccttccgcacgtgcctgtcaacgacgaccaggcg
caccgtctcagaatgggcaatcccatcatcctgcgcggccgcgacgcaccgctggcgacg
cccgaggcctatgccacggcgcgcggcaagctggtcgctatcggtgagatcgccgagggc
gaattccgccccaagcgtgtcttcgccggaagctaa
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