KEGG   Ensifer sp. PDNC004: JVX98_24415
Entry
JVX98_24415       CDS       T09472                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
enp  Ensifer sp. PDNC004
Pathway
enp00010  Glycolysis / Gluconeogenesis
enp00020  Citrate cycle (TCA cycle)
enp00260  Glycine, serine and threonine metabolism
enp00280  Valine, leucine and isoleucine degradation
enp00310  Lysine degradation
enp00380  Tryptophan metabolism
enp00620  Pyruvate metabolism
enp00630  Glyoxylate and dicarboxylate metabolism
enp00640  Propanoate metabolism
enp00670  One carbon pool by folate
enp00785  Lipoic acid metabolism
enp01100  Metabolic pathways
enp01110  Biosynthesis of secondary metabolites
enp01120  Microbial metabolism in diverse environments
enp01200  Carbon metabolism
enp01210  2-Oxocarboxylic acid metabolism
enp01240  Biosynthesis of cofactors
Module
enp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
enp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
enp_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
enp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
enp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:enp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JVX98_24415 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JVX98_24415 (lpdA)
   00620 Pyruvate metabolism
    JVX98_24415 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JVX98_24415 (lpdA)
   00640 Propanoate metabolism
    JVX98_24415 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JVX98_24415 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JVX98_24415 (lpdA)
   00310 Lysine degradation
    JVX98_24415 (lpdA)
   00380 Tryptophan metabolism
    JVX98_24415 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JVX98_24415 (lpdA)
   00670 One carbon pool by folate
    JVX98_24415 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:enp04147]
    JVX98_24415 (lpdA)
Enzymes [BR:enp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JVX98_24415 (lpdA)
Exosome [BR:enp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JVX98_24415 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 GIDA HI0933_like FAD_binding_2 DAO FAD_binding_3 UDPG_MGDP_dh_N FAD_oxidored Lys_Orn_oxgnase 3HCDH_N
Other DBs
NCBI-ProteinID: QRY67474
LinkDB
Position
complement(3351879..3353273)
AA seq 464 aa
MKEISCKLLVIGAGPGGYICAIRAGQLGIDTVIVEKAKAGGTCLNVGCIPSKALIHAAEE
FHKLRAAASGRNPLGLSLANPSIDLAHTIAWKDGIVGRLNGGVIGLLKKAGVKAVVGAAR
FIDGKTVDVETETGLQRIRAEAIVIATGSAPIELPDLPFGGPIISSTEALSLKSVPKSLA
VIGGGYIGLELGTAFAKLGSHVTVLEAQPRILPLYDADLTKPIGKRLGELGIEVFTQTVA
KSYSTETGSLQAEHNGRAINVAAEKVLVTVGRQPVTEGFGLEEIDLDRTGRFIRVDDQCR
TSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVTAGL
SPDEARASGIEIKIGQFPFQANGRAMTTLAEDGFVRIVARADNHLVLGIQAVGHGVSELS
ASFSLAIEMGARLEDIAGTIHAHPTQSEAFQESALKALGHALHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaaggaaatttcctgcaagctgctcgtcatcggcgccggccccggcggctatatctgc
gccatccgcgccggccagctcggcatcgacaccgtcatcgtcgagaaggccaaggccggc
ggcacctgcctgaatgtcggctgcatcccctccaaggccctgatccatgcggctgaagag
tttcacaaactgcgcgcggccgcttccggccgcaacccgctcggcctgtcgctggccaac
ccctcgatcgatctcgcccataccatcgcctggaaggacggtatcgtcggccggctgaac
ggcggcgtcatcgggcttttgaagaaagccggcgtcaaggcggtcgtcggcgcggcccgc
ttcatcgatggcaagacagtcgatgtcgagacagaaaccgggctgcagcgcatccgcgcc
gaagcgatcgtgatagccaccggctccgcaccgatcgagctgccggacctgcccttcggc
gggccgatcatctcctcgaccgaggccctgtcgttgaagagcgtgccgaagagcctcgct
gtcatcggcggcggctatatcggcctcgaactcggcaccgcctttgccaagctcggcagc
cacgtcaccgtgctcgaagcgcagccccgcatcctgccgctgtatgacgccgatctgacg
aagccgatcggcaagcgccttggcgaactcgggatcgaggtcttcacccagacggtcgcc
aagagctactccacggagaccggcagcctgcaagccgaacacaacggccgcgccatcaat
gtcgctgccgaaaaggtgctcgtcaccgtcggtcgccagccggtgaccgaaggcttcggc
ctcgaagaaatcgacctcgaccgcaccggccgcttcatccgcgtcgacgaccagtgccgc
acctccatgcgcggcatctatgcgatcggcgatgtcaccggcgagccgatgctggcgcac
cgcgccatggcgcagggcgagatggtcgcggagatcgtcgccggccacaagcgcagctgg
gacaagcgctgcatccccgccgtctgcttcaccgatcccgagatcgttaccgctggcctt
tcgcccgacgaagcacgcgcgagcggcatcgagatcaagattggccagttccccttccag
gcgaacggccgcgccatgacgacgcttgccgaggacggtttcgtgcgcatcgtcgcgcgc
gccgacaaccatctggtgctcggcatccaggcggtcggccacggcgtctcggaactctcg
gcaagcttcagcctggcgatcgaaatgggcgcgcgcctcgaagatatcgctggcacgatc
catgcgcatccgacgcagtccgaagccttccaggaatcggcgctgaaggcgctgggacac
gcactgcatatctga

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