Ensifer sp. PDNC004: JVX98_29565
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Entry
JVX98_29565 CDS
T09472
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JVX98_29565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enp03400
]
JVX98_29565
Enzymes [BR:
enp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JVX98_29565
DNA repair and recombination proteins [BR:
enp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JVX98_29565
Prokaryotic type
JVX98_29565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QRY71041
LinkDB
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Position
unnamed_2:259987..260814
Genome browser
AA seq
275 aa
AA seq
DB search
MAETFAGWENDLPPVWRDALGAVGDDFSRIDADLDLEPWEPIFPVRRGRVFPGQPRGAHA
LAAFDGIAPDGVRCLVLGQDPYPEPGFATGRAFEAGNLAAWGELDKMFSKSIRAYMQLIA
AARLGDEDLARDFGRWPDVRHLLCDPAGSFEPPSLIADRWVREGVLLLNASLTLSRFRVD
IDPHQSRGHLAFWRPLMLRVVDALLARGKPIVFLGFGGAAADIFAEAGVAKGRKDHVAYI
QREHPAFADKVLGRENPFLLSNSHLEAMGDRPIAW
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacgtttgcgggctgggagaacgaccttccgcctgtttggcgcgatgcgctc
ggcgccgtcggcgacgatttctcccgtatcgatgcggaccttgatctcgagccgtgggaa
ccgatcttcccggtgcgccgcggccgggtttttcccggccagccacggggcgcacatgcg
ctcgcggcgtttgacggcattgcacccgatggcgtgcgctgcctcgtgcttgggcaagat
ccttatcccgagccgggttttgcaacggggcgggcgttcgaggcgggcaacctggcggcg
tggggcgagctggacaagatgttctcaaagagcatccgcgcctatatgcagctgatcgcg
gctgcgcggctgggcgacgaggatctcgcgcgcgatttcggccggtggccggatgtgcgg
catctgctttgcgatcccgcagggtcgttcgagccgccgagcctgatcgcagatcgttgg
gtcagggagggggtactcctgctcaatgcgtcgctgacgctttctcgctttcgtgtcgat
atcgatccgcaccagtcgcgcggtcaccttgccttctggcggccgttgatgctgcgcgtg
gtcgacgcgcttttggcgcgcggtaagccaatcgtcttcctcggcttcggtggcgcggct
gctgacatctttgcagaagccggcgttgccaaggggcgcaaggatcatgtcgcctatata
cagcgcgagcatcccgcctttgccgacaaggtgctcggccgggaaaatcctttccttctc
agcaattctcatctggaggcgatgggcgaccggcccatcgcatggtga
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