Enterococcus sp. SB12: RBL01_000885
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Entry
RBL01_000885 CDS
T10850
Symbol
cshA
Name
(GenBank) degradosome RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
enq Enterococcus sp. SB12
Pathway
enq03018
RNA degradation
Brite
Enzymes [BR:
enq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBL01_000885 (cshA)
Messenger RNA biogenesis [BR:
enq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBL01_000885 (cshA)
Ribosome biogenesis [BR:
enq03009
]
Prokaryotic type
rRNA helicases
RBL01_000885 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XME79229
LinkDB
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Position
177562..179073
Genome browser
AA seq
503 aa
AA seq
DB search
MKFKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPML
EKIDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQRQTLLF
SATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYYVRAKEYEKFDIMTRLFDVQTPE
LTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKK
RMTTLRPPTEKEAFKGQLGAAVEQIETKLAENGLDKYLQTADKLLEEYSAQDLVALLLKT
TAKDPADAVPVKITPERPLPMQKKGYNKNGKRGGGNNRNRRDGGNYRGNKSKGGYSKNNN
SQKDGGKRHNDKKRGFVIRSNND
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaactagaattatcaccagaattgttgaaatcagtcgaacgcgctggt
tttgaagaagcaacacctatccaatcagaaacgattccactagcattagctggaaaagac
gttattggacaagcacagacaggtacagggaaaacagctgcatttggattaccaatgtta
gaaaaaatcgatccagatcgtcacgaattacaaggtttagttatcgcaccaacacgtgaa
ttagctatccaaacacaagaagaattatatcgtttagggcgcgacaaaaaagtacgtgta
caagccgtttacggcggagcagatattggccgtcagatccgtggcttgaaagatcgtcca
catatcgttgtgggtacaccaggacgtatgcttgaccacatcaaccgccacacattgaaa
cttggaaccgttcaaacattagttttggatgaagcagatgaaatgttgaatatgggcttc
ttggaagatatcgaaaaaatcatttcacaagttcctgatcaaagacaaacattacttttc
tcagcaacgatgccgccagctatcaagaatattggcgttaaattcatgaaaaatccacat
catgtgaagatcaaagcgaaagaaatgacagctgacttgatcgatcaatactatgtccgc
gcaaaagaatacgaaaaattcgatatcatgactcgcttgtttgatgttcaaacacctgaa
ctaacaatcgtcttcggacgtacaaaacgccgtgtagacgaattggcacgcggattagaa
gcacgcggttaccgtgcagaaggaatccatggcgatttgtctcaacaaaaacgaatgagc
gtattgcgttcatttaagagcggtcatttagatatccttgtagcgacagacgttgctgca
cgtggattagatatttcaggtgtcactcatgtgtacaactatgatatccctcaagatcca
gaaagctacgttcaccgtatcggacgtacaggccgtgccggaaaaggcggtatgtctgtg
actttcgttacaccaaatgaaatggactacttgcatgtgattgaaaacttgacgaaaaaa
cggatgacgactttacgtccaccaaccgaaaaagaagcattcaaaggtcaattaggtgct
gcagttgaacaaatcgaaacaaaacttgcagaaaatggtctagataaatacctgcaaaca
gcagataaattattagaagaatattctgcacaagatttagttgcacttttgctaaaaacg
acagcaaaagatccagctgatgcagtgccagtgaagatcacaccagaacgcccattgcca
atgcagaaaaaaggatacaataaaaatggcaaacgtggtggcggaaacaaccgtaatcgt
cgtgacggcggtaattatcgtggaaacaaatcaaaaggcggttatagcaaaaacaataac
agccaaaaagatggcggtaaacgtcacaatgataaaaaacgcggatttgtaatccgttca
aataacgattaa
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