Enterococcus sp. SB12: RBL01_008025
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Entry
RBL01_008025 CDS
T10850
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
enq Enterococcus sp. SB12
Pathway
enq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
enq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBL01_008025 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enq03021
]
RBL01_008025 (rpoD)
Transcription machinery [BR:
enq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBL01_008025 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Myo5a
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
XME78288
LinkDB
All DBs
Position
complement(1629236..1630345)
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AA seq
369 aa
AA seq
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MANGTDKKTYEAAVAAFIKENKPKRQVVYDDLSNQLATPFTLNADEMDKLIQKIEDAGIS
VVDENGDPSIHSLKSAEKKAEQAKTEDLSAPTGVKINDPVRMYLKEIGRVSLLTAEEEVA
LALKIEEGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEI
GAEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPAEHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKQLKDFLE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggaacagataaaaaaacgtatgaagcagcagtagcagctttcatcaaagaa
aacaaacccaaacgacaagttgtatatgatgatttatccaatcagcttgctacaccattc
actttgaatgcagatgaaatggacaaattgatccaaaagattgaagacgcaggtatcagt
gtggtggatgaaaatggtgatccatcaattcacagcttgaagagtgctgagaaaaaagct
gaacaagcaaaaacagaagatctatctgcgccaaccggtgtaaaaatcaatgacccggtt
cgtatgtatctgaaagaaattggccgtgtctcccttttaactgcggaagaagaagtagcg
ttagcattgaaaatcgaagaaggcgaccaagaagcgaaacagcgtctggcagaagcaaac
cttcgtttagtagtaagtatcgctaaacgttatgtaggacgaggcatgcagttccttgac
ttgatccaagaaggaaacatgggactgatgaaggcagttgaaaaatttgactaccgcaaa
ggatttaagttttcaacctatgctacatggtggattcgtcaagccatcactcgagcaatc
gctgaccaagcacgtacgatccgtattccagttcatatggttgaaacaattaataaattg
atacgtatccaacgtcaattgctgcaagaccttggaagagaacctacgccagaagaaatc
ggtgcggaaatggatcttccaacagaaaaagtccgagaaatcttgaaaatcgcgcaagaa
cctgtttcccttgaaacgccaatcggtgaagaagatgactctcacttaggtgatttcata
gaagaccaggaagcaacaagtccagcagaacacgcagcttatgagttactaaaagaacaa
ttggaagatgtactagatacattgactgaccgggaggaaaatgtccttcgcttacgtttt
ggtttagatgatggccggacgagaacattggaagaagtagggaaagtatttggtgttact
cgggaacgtattcgtcagatcgaggctaaagcattaagaaaattgcgccatccttctcgt
tcaaaacaattaaaagatttcttagaataa
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