Enterococcus sp. SB12: RBL01_011035
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Entry
RBL01_011035 CDS
T10850
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
enq Enterococcus sp. SB12
Pathway
enq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBL01_011035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enq03400
]
RBL01_011035
Enzymes [BR:
enq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RBL01_011035
DNA repair and recombination proteins [BR:
enq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBL01_011035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_22
HHH_8
SLFN-g3_helicase
T2SSE
DUF6386
AAA
IMS_HHH
AAA_12
AAA_28
HHH
CbiA
NTPase_1
TBPIP
AAA_29
NPHP3_N
HTH_IclR
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XME78817
LinkDB
All DBs
Position
complement(2206582..2209170)
Genome browser
AA seq
862 aa
AA seq
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MQPEEMPYFVGTVAAIFFQNPSNFYKVLLVHISETTADYREKEIVVTGSFGDIQENETYR
FYGELVDHPKYGRQLKLERYEQEKPTTANGIVAYLSSEKFPGIGKKTAEKIVELLGEDAI
EKIIADPSVLKQISGLTKPKREMLAETIRLNHGMDQVIMGLNRYGFGSQLAFSIYQAYKN
ESLDIIEENPYQLVEDIEGIGFKRADNLAEQIGIAADSPRRIRAAILHQIFQHAVQTGDT
YVPAETLLQQTIRILETSRPIEIQPDQVATVIIQLVEEGKIQQEETNLYENSLYFSEWGI
GNSIQRLLSRKKEIHYPEKEVQKNIRRIEKIFGIQYGPSQEQAIAEAIRSPLFILTGGPG
TGKTTVINGIVNLFAELNGLELDPSKYTQEIFPILLAAPTGRAAKRMNETTGLPASTIHR
LLGLNGREKTPSVSTKELEGGLLIVDEMSMVDTWLANTLFKAIPTNMQVILVGDKDQLPS
VGPGQVLHDLLEIEQIPKMELNQIYRQGDGSSIIPLAHEIKEGRLPKDFTKNQKDRSYFR
SDAYQIEPLISKIVEKAKNKGFRAQDIQVLAPMYRGPAGIDALNKMMQEIFNPGKPGKKE
VHWNDTVYRIGDKVLQLVNTPELNVFNGDMGEITGIILAKDSEDKVDELVIQFDANEVTY
KRNEWNKITLSYCCSIHKSQGSEFKMVILPMVHQYQRMLQRNLLYTAVTRSKELLILLGE
EQAYVTCVANESASRMTTLKSRIIDNDKMNITLRTKLAAYEDSLVGNDPFEDGNYTKEPR
VVKEKLPVEDDSGTNESKKQVMETVEPDLFSSFVGEEKKEEVEPAVSKDFVLTAEVIDNQ
LVDPMIGMENSSPYDFIPAKNA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagaagaaatgccttatttcgttggtacagttgccgcgattttttttcaaaat
cctagtaatttttacaaagtgcttttggtacacatcagtgaaaccacagctgattaccgt
gaaaaagagattgtagtcaccggaagtttcggcgatattcaagaaaatgagacttatcgt
ttttatggagaattagtggatcatcctaaatacggaaggcagcttaaactcgaaagatat
gagcaagaaaagccaacaactgcaaatgggatcgtagcgtatctttccagcgaaaaattc
ccaggaatcgggaagaaaacagcagaaaaaattgtagaattgctgggagaagatgctatc
gaaaaaatcattgctgatccttcggtattaaaacaaatctccggtttgacgaagccaaaa
agagaaatgcttgctgagacgattcggctaaaccacgggatggatcaagtgatcatggga
ctgaatcgttacgggttcggtagtcagttagctttcagtatctaccaggcctataagaac
gagtctttggatatcatcgaagaaaatccgtaccagctagtcgaagacatagaaggaatc
gggttcaaacgtgcagataatctagccgaacaaatcggtattgcagcagattcaccgaga
agaattcgagcagctatcttgcatcagatttttcagcatgcagttcaaacaggagataca
tacgtaccggcggagacattgcttcagcaaacgatccgtattttagaaacaagtcgccca
attgaaatccagcctgatcaggttgctactgtaattatccaacttgttgaagaaggaaag
atacaacaagaagagactaatctttacgaaaacagtttgtacttttctgaatgggggatc
ggtaattcgatccagcgccttctcagtcgtaaaaaagaaatccattatcctgaaaaagaa
gtgcagaagaatattcggcgtatcgaaaaaatattcggcatacagtatggaccttcgcaa
gaacaagctatcgctgaagcaatccgttcccctctatttattttaacaggaggaccaggt
acggggaaaactactgtgatcaacggaatcgtcaatctttttgcagagttgaacggactg
gaattggatccttcaaaatatacccaagaaatttttcctattctacttgcagcaccaact
ggccgagcagctaaacgaatgaacgaaacgacaggtctgcctgccagtacgatccatcgt
cttctggggctgaatggacgggaaaaaacaccttcagtcagtacgaaagaattagaaggc
ggacttttgattgttgatgagatgtctatggtcgatacatggctggctaacacattattc
aaagcgattccgacgaatatgcaagttatcttagtaggagacaaagatcagcttccctct
gtcggtcctggtcaagtactccatgatcttttggaaatcgaacaaattcccaaaatggaa
ctcaatcagatttatcggcaaggtgatggttctagtattattcctcttgcccatgagatc
aaagaaggacgtctgccaaaagatttcacaaagaatcaaaaagatcgttcctatttccga
agtgatgcttatcaaattgaacccttgatctctaaaattgtggaaaaagcgaaaaataag
ggattccgtgcacaagatatccaagtattagcaccaatgtatcggggacctgcagggatc
gatgcgttaaataaaatgatgcaggagatattcaatccagggaaacctggaaaaaaggaa
gtacattggaacgacaccgtttatcggataggagacaaagtcctccaattagtcaatact
cccgaattgaatgtattcaatggagatatgggagaaatcacgggtatcatcttggcaaaa
gattctgaagataaagtggatgaattagttatccagtttgatgcaaatgaggtcacttat
aaaagaaacgaatggaataaaatcactctttcttattgttgctcaatccataaatcacaa
ggcagtgaattcaagatggttattttgcccatggtccatcaatatcagcgaatgcttcag
cgtaatttgctctacacggcagtgacccgcagtaaggaactgttgattttgttaggggaa
gagcaagcctatgtcacttgtgtagcgaatgaatcagcaagccggatgactacgttgaaa
tcaaggatcatagataatgataaaatgaatatcactctgcggacaaaactagcagcttat
gaagattctttggtcggaaatgatccatttgaagatgggaactatacaaaagagccacgg
gttgtaaaagaaaagctacctgtagaagatgacagtgggacgaatgaatcgaaaaaacaa
gtaatggaaacagtggaaccagatctgttttcttcatttgttggagaagaaaagaaagaa
gaggtagaacctgctgtttctaaagatttcgttcttacagcagaagtgatcgataaccag
ttagtagatccgatgattggtatggaaaacagttctccctacgattttataccggcaaaa
aatgcttga
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