Enterococcus sp. SB12: RBL01_012385
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Entry
RBL01_012385 CDS
T10850
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
enq Enterococcus sp. SB12
Pathway
enq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBL01_012385 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enq03021
]
RBL01_012385 (rpoC)
03400 DNA repair and recombination proteins [BR:
enq03400
]
RBL01_012385 (rpoC)
Enzymes [BR:
enq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBL01_012385 (rpoC)
Transcription machinery [BR:
enq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBL01_012385 (rpoC)
DNA repair and recombination proteins [BR:
enq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBL01_012385 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
PRC
Motif
Other DBs
NCBI-ProteinID:
XME79031
LinkDB
All DBs
Position
complement(2487817..2491470)
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIEPGNTNLEKKQLLTEREYREKREQYGQEFQAAMGAEAIKQLLD
NVDLDAEAAELKEELKSAQGQKRTRAIRRLDILEAFRASGNQPSWMVMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE
MAIELFKPFVMRELVQRELASNIKNAKRKIERQEDEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVQGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMVFRDQNEAVIAWRNGYVHLHSRIGVN
PNSLGEKPFTEWQKERTMITTVGKIIFNEIMPPEFPYLNEPTDFNLTVQTPDKYFVEAGT
DIPAHIKEQELVLPFKKKNLGNIIAEVFKRFKVTETSKMLDRMKDLGYKHSTHAGITVGI
ADISVLNEKQEIIENAHKQVETITKQFRRGLITDDERYERVIAVWNAAKDSIQQKLMEGL
EAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREEDCGTDRGLEIQAIREGNEIIESLE
DRLVGRYTRKEVRHPETNELIIAGNQLISEDIAKQIVDAGVETVTIRSVFTCNTKHGVCK
HCYGRNLATGSDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIF
EARNPKGQAVITEVTGDVIDISEDPATRTKEVTIKGKTDTRTYTVPYTARMKVAEGDMIH
RGAPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKVR
VMDPGDTDILPGTLLDIADFKDQNYNTLVSGGVPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMQRYRDMEPKEVGVASENVYSIS
DIEAQMAAEDAMNNQTK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataaattcgaaagtatgcaaataggtttggcttctcccgaaaaaatc
agaagctggtcttacggtgaagtaaaaaaacctgagacgattaactatcgcaccttaaaa
cctgaacgcgaagggttgttctgtgagcggatttttggtcctacaaaagactgggaatgt
gcctgcggaaaatacaaacgtatccgttataaaggaatcgtttgtgatcgatgcggagtg
gaagttactcgttcgaaagttcgccgtgaacgcatgggacatattgaattagcagctcct
gtttcacatatctggtactttaaagggattccttcacgtatgggtcttgtattagacatg
agcccacgcgctttggaagaaatcatttattttgcttcatatgtagtcatcgaaccagga
aatacgaatttagagaaaaaacaattgttgacagaacgcgaatatcgcgaaaaacgtgaa
caatatggacaagaattccaagctgctatgggtgcagaagcgatcaaacaattacttgat
aatgttgatctagatgcagaagcagccgaattgaaagaagaattgaaatctgcacaagga
caaaaacgtacacgtgcaatccgccgtttggatattttagaagcattccgcgcttcagga
aatcaaccaagctggatggttatggacgttatccctgttattccaccagatttacgccca
atggttcaattagaaggtggacgttttgcaacaagtgacttgaatgatctttaccgtcgt
gtaatcaaccgtaataaccgtttgaaacgtttgttagacttgaatgcacctggaatcatc
gttcaaaatgaaaaacgtatgctgcaagaagcagtagatgcattgatcgataacggtcgt
cgcggacgtccagttactggaccaggtaaccgcccattgaaatctctttctcatatgttg
aaagggaaacaaggtcgtttccgtcaaaacttgctaggtaaacgtgtcgactactccggt
cgttctgttatcgttgttggacctttcttgaagatgtaccaatgtggacttccaaaagaa
atggctatcgaattattcaaaccattcgtgatgcgtgagcttgttcaacgcgaactagct
tcaaacatcaaaaatgcgaaacgtaaaatcgaacgtcaagaagacgaagtatgggatgtt
ttagaagacgtaatcaaggaacacccagtattgctgaaccgggcacctacgcttcaccga
cttggtatccaagcattcgaaccagttttagtacaaggacgcgcaatccgtttgcatcca
cttgtatgtgaagcttataatgccgatttcgatggagaccaaatggctgtccacgtgcca
ttgaatgaagaagcacaagcagaagcacgtatgttgatgttagctgctcaaaacatcttg
aaccctaaagatggtaaaccagttgttactccttctcaagatatggttctaggtaactac
tacttgacaatggaagaagaaggacgcgaaggcgaaggaatggtcttcagagatcaaaac
gaagccgttatcgcatggcgcaacggatatgttcatttacattcacgtatcggtgtgaac
cctaactcattaggtgaaaaaccatttactgaatggcaaaaagaacgtacgatgatcaca
acagttggtaagatcatcttcaacgagatcatgcctcctgaattcccttatctgaatgaa
ccaacagacttcaacttgaccgtccaaacaccggacaaatactttgttgaagctggtact
gatattcctgcacatatcaaagagcaagaattagtattaccgttcaagaagaaaaactta
ggaaacatcatcgcagaagtcttcaaacgattcaaagtaacagaaacttctaagatgctt
gaccgtatgaaagacttagggtataaacattcaacacatgccggtatcacagtagggatc
gctgacatcagtgtactgaatgaaaaacaagaaatcattgaaaatgcccataaacaagtt
gaaactattacaaaacaattccgtcgtggtctgattacagatgatgaacgttatgaacgt
gtcattgctgtttggaacgctgcaaaagacagcatccaacaaaaactgatggaaggtttg
gaagcgaaaaacccaatcttcatgatgtctgattctggagctcgtgggaacatttccaac
tttacacagcttgccggaatgcgtggtttgatggccgctcctaatggtcgaatcatggaa
ttgccaatcatttcgaacttccgtgaaggactatccgtcttggaaatgtttatctcaact
cacggggctcgtaaagggatgaccgatacagccttgaagactgccgattcaggttacttg
actcgtcgtctggttgacgtggcccaagatgtaatcattcgtgaagaagattgcggtact
gaccgaggtcttgaaatccaagcaatccgtgaaggaaatgaaatcatcgaatcattagaa
gatcgtttagtgggacgttacactcgtaaagaagtacgtcatcctgaaacaaatgaattg
atcattgcaggaaaccaattgatttccgaagacatcgcaaaacaaatcgttgatgcaggt
gtcgaaacagtgacaatccgttctgtcttcacatgtaatacaaaacatggtgtctgcaaa
cattgttacggacgcaaccttgcaactggctctgacgttgaagtcggagaagcagttggt
acgatcgccgctcaatcaatcggtgaacctggtactcagttgacgatgcgtacattccat
acgggtggggttgccggagacgatatcactcaaggtcttcctcgtgtccaagaaatcttt
gaagcacgtaatccgaaagggcaagcagtgatcacagaagtaacaggggatgtcatcgat
atctcagaagatcctgcaacacgtaccaaagaagtaacaatcaaaggaaaaacagataca
cgtacgtatactgttccttatacagcacgtatgaaagtagcagaaggcgatatgatccac
cgtggtgcgccattgacagaaggatcaatcgatccaaaacaattgttgcaagttcgcgat
gtattatctgttgaaaactacttgcttcgtgaagtacaacgtgtttaccgtatgcaaggg
gtagaaatcggcgacaagcatatcgaagtaatggttcgtcaaatgctgcgtaaagttcgt
gtaatggatccaggtgatacagatatcttaccaggtacattattagacatcgcagacttt
aaagatcaaaactacaatacgctagtctcaggaggcgttcctgcaacttctcgacctgtc
ttgctaggtatcacaaaagcatcattagaaacaaatagtttcttatctgctgcatcattc
caagaaacaactcgtgtcttgacggatgctgcgatccgcggtaaaaaagatcctcttctt
ggtttgaaagaaaatgttatcatcggtaagatcatcccagctggtactggtatgcaacgt
taccgtgacatggaaccaaaagaagtcggtgtagcaagcgaaaatgtctacagtatttca
gatattgaagcacaaatggctgcagaagacgcaatgaacaatcaaacaaaatag
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