Enterobacter sp. R4-368: H650_01980
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Entry
H650_01980 CDS
T02700
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
enr
Enterobacter sp. R4-368
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enr03016
]
H650_01980
Enzymes [BR:
enr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H650_01980
Transfer RNA biogenesis [BR:
enr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H650_01980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AGN83992
LinkDB
All DBs
Position
complement(273499..275433)
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDKI
IAVIHSDKDRESAEPEELVEPFLTRFVGKVQKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFAEDHFVPWWVTLARHNLEKEAPNGVGT
EMLDDGLQRVDLTALDFVTIDSASTEDMDDALYVAQTAEGELQLTVAIADPTAWIAEGSK
LDEAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALVCRMTLDADGAIKDNIEF
FAATIESKAKLAYDDVSDWLENTGNWQPTNDAIAAQIRLLQRVSQLRAQWRQNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHLGFD
PANSEQLAAMLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISVE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETPKRPQDDATVQMSERRRLNRM
AERDVGDWLYARFLQNKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGEIVFKVTDVIDVTIAEVRMETRSVIARPVL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaacttcattcccaaactccg
cgtgcggaaggtgttgtaaaaggcactgaaaaaggctttggatttctggaagtcgacgcg
caaaaaagctacttcattccgccaccgcagatgaagaaagtgatgcacggcgacaagatt
attgccgtcatccacagcgataaagaccgtgaaagcgcggagcctgaagagctggtcgag
ccgttcttgacccgttttgttggcaaagtgcaaaagaaagacgatcgtctctctatcgtg
ccggatcatccgttgctaaaagatgctatcccctgccgcgccgcccgtggcgttgagcat
gatttcaaagagggcgactgggccgtcgctgaaatgcgtcgccatccgctgaaaggcgat
cgcggtttctacgctgaactgacgcagtttatcaccttcgctgaagaccactttgtgccg
tggtgggtcaccctggcgcgccacaatctggaaaaagaagcgccaaatggcgtggggacc
gaaatgctggatgacggcttgcagcgtgtggatttaaccgcgctggattttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgttgcgcagaccgctgaaggc
gaactgcaactgaccgtggcaattgccgatcctacggcctggattgccgaaggcagcaag
cttgatgaggctgcgaagatccgcgctttcaccaactatctgccgggtttcaatatccct
atgctgccgcgcgagctgtctgacgatctttgctctctgcgcgccaacgaagtgcgtccg
gcgctggtttgtcggatgacgctggatgcagacggcgctatcaaagacaatatcgaattt
ttcgcggcgaccattgagtcgaaagccaaactggcttatgacgatgtctccgactggctg
gaaaacaccggtaactggcagccaacaaacgatgccatcgcggcgcagatccgtctgctg
cagcgcgtcagccagctgcgcgcccaatggcgccagaaccacgcgctggtatttaaagac
cgtccggattaccgctttgtacttggcgagaaaggcgaagtgctggatatcgttgccgag
ccacgccgcattgctaaccgcattgttgaagagtcaatgattgccgccaatatctgcgct
gcacgcgtactgcgcgacaagctcggctttggcatttataacgtgcaccttggtttcgac
ccggcgaacagcgaacaactggccgcgatgctgaaaacgcacggtatgcatgttgatgcc
gaagaagtgctgacgctggaaggtttctgcaaattgcgtcgcgagctggatgcgcagcct
tcaggcttcctcgatagccgcattcgccgcttccagtctttcgcggaaatcagcgttgaa
cctggcccgcattttggtcttggcctggaagcgtacgcgacctggacctcgcctatccgt
aagtacggcgacatgatcaaccatcgcctgctgaaagcgattatcaaaggcgaaacgccg
aagcgcccacaggacgatgccacggtgcaaatgtctgagcgccgtcgcctgaaccgcatg
gcggaacgcgatgtcggcgactggctctacgcccgtttcctgcaaaacaaagccggtacc
gatacccgtttcgcggcagaaattattgatgtcagccgcggcggtatgcgcgtacggctg
gtggataatggtgccgttgcctttattccggctccgtttattcatgccgtgcgcgacgag
ctggtgtgcagccaggaaaatggcaccgtgcaaattaaaggtgaaatcgtctttaaagtg
accgacgttattgatgtcacgattgcggaagtccgtatggaaacccgcagcgttattgcc
cgcccggtgctgtaa
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