Enterobacter sp. R4-368: H650_02210
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Entry
H650_02210 CDS
T02700
Name
(GenBank) RNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
enr
Enterobacter sp. R4-368
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enr03019
]
H650_02210
Enzymes [BR:
enr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H650_02210
Messenger RNA biogenesis [BR:
enr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H650_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
T2SSE
ResIII
PhoH
NACHT
SLFN-g3_helicase
NTPase_1
ABC_tran
AAA_16
TsaE
Motif
Other DBs
NCBI-ProteinID:
AGN84037
LinkDB
All DBs
Position
320707..324711
Genome browser
AA seq
1334 aa
AA seq
DB search
MFEFLEQEKGCGDVLSYCDCELKMFPGSALPNNAMTEQQKLTITDLSAQLSTLMLRDQQR
FARRLHGSKKVKNPESQQALLQTLAQEINEAAGKVAQREAARPTIDYPDNLPVSQKKQAI
LEAIRDNQVVIVAGETGSGKTTQLPKICMELGRGIKGMIGHTQPRRLAARTVANRIAEEL
KTEPGGCIGYKVRFSDHVSDSTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNI
DFLLGYLCELLPRRPDLKIIITSATIDPQRFSRHFNNAPIIEVSGRTYPVEVRYRPIVEE
ADDTERDQLQAIFDAVDELGRESAGDILIFMSGEREIRDTADALSKRDLRHTEILPLYAR
LSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE
PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG
DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQQTAYKLTPLGRQLSQLPVDPRLARMV
LEAQKHGCVREAMIITSALSIQDPRERPLDKKQASDEKHQRFHDKESDFLAFVNLWNYLG
EQQKALSSNQFRRQCRVDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIAL
LTGLLSHIGMKDADKQEFTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAAR
IDPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPMLCR
ELFIRHALVEGDWQTRHAFFRDNLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHE
VISARHFDSWWKKASREAPDLLNFEKSMLIKEGAEGVSKLDYPNFWHQGNLKLRLSYQFE
PGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPTRRNFVPAPNYAE
AFLGRVTPLELPLLDALERELRRMTGVTVDRDDWHWDQVPDHLKISFRVVDDKNKKLLEG
RSLAELKERLKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVD
ERDSVAIKLFDNPQEQQQAMWRGIRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVL
DLIDDCISCGVDKLIDDAGGPVWTEESFAALHEKVRAELNETVVEIAKQVEQILTAVFNI
NKRLKGRVDMTMALGLSDIKTQMSGLVYRGFVTGNGFRRLGDTLRYLQAIEKRLEKLAVD
PHRDRAQMLKVEQTQQAWQQWLNKLPPARREDEDVKAIRWMIEELRVSYFAQQLGTPYPI
SDKRILQAMEQISA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatttcttgaacaagaaaagggttgcggcgatgtgctatcctactgcgattgc
gaacttaagatgtttcccggcagtgctctgcccaataacgctatgacagaacaacagaaa
ttgacgattaccgatctcagcgcgcagctcagcaccctgatgctacgcgaccagcagcgc
ttcgcccgccgcctgcatggcagcaagaaagttaaaaatcctgaatctcagcaagcactg
ctgcagacgctggcgcaagagataaacgaagccgccggaaaagtggcgcagcgcgaagcc
gcgcgcccgaccattgattacccggacaacctgccggtcagccagaaaaaacaggcgatc
ctcgaagctatccgcgataaccaggtggtgattgtggccggcgaaaccggctccggtaaa
accacgcagttaccgaaaatttgcatggagctggggcgcggcattaaagggatgattggt
catacccagccgcgtcgtctggcggcgcgcaccgttgccaaccgtattgccgaagagctg
aaaaccgaaccgggcggttgcattggctataaagtgcgtttcagcgatcacgttagcgac
agcaccatggtcaagctgatgaccgacggtattctgctggcggaaatccagcaggatcgc
ttgctgatgcagtacgacaccatcattatcgatgaggcgcacgaacgcagcctgaacatc
gattttctgctgggttatctgtgtgaattactgccgcgccgcccggatctgaaaattatc
atcacctccgccaccatcgatccgcaacgtttctcgcgccatttcaataacgcgccgatt
atcgaagtgtccgggcgcacttacccggtggaagtgcgctatcggccgattgtcgaagaa
gcggacgacacggaacgcgaccagcttcaggcgatattcgatgcggtggatgagcttggg
cgcgaaagtgcaggcgatattctgatctttatgagcggcgagcgggaaatccgcgacacc
gctgatgccctgagcaagcgcgatctgcgccacacggagatcctgccgctgtatgcgcgt
ttatcaaacagtgagcaaaaccgcgtattccagccgcacagcgggcggcgcatcgtgctg
gcgaccaacgtggcggaaacgtcgctgaccgtaccgggcatcaaatatgtcattgatccg
ggtacggcgcgcatcagccgctacagctatcgcaccaaagtgcagcgtttgccgattgag
ccgatttcacaggcctctgccaaccagcgtaaagggcgctgcggccgcgtgtcggaaggg
atctgtattcgtctctattcagaagatgatttcctgtcacgcccggaatttaccgatccg
gaaattctgcgcaccaacctggcatcggtcattttgcaaatgacagctttagggcttggt
gatatcgccgccttcccgtttgttgaagcgccggataaacgcaatattcaggacggtgtt
cgcctgctggaagagttgggcgcgatcaccaccgacgagcagcagaccgcctacaaactg
acgccgctgggccgccagctatcgcaactgccggtcgatccgcgcttagcgcgtatggta
ctggaagcgcaaaaacatggctgcgtgcgcgaagcaatgatcattacctcggcgctgtcg
attcaggatccgcgcgaaagaccgctggataaaaagcaggcttcagacgagaagcaccag
cgctttcatgataaagagtctgacttcctcgcttttgtgaacctgtggaattacctgggc
gagcagcaaaaagcgctctcgtcaaaccagttccgtcgtcagtgccgggtggattacctg
aactatctgcgcgtgcgcgaatggcaggatatctacacccaactgcgccaggtggtgaaa
gagttagggatcccggtcaacagcgagcctgcggaatatcgcgaaattcatatcgcactg
ttaaccggtttgctgtcgcacattggtatgaaagatgccgataaacaggaatttaccggc
gcgcggaatgcccgtttttccatcttcccgggctcgggtttattcaaaaaaccgccgaaa
tggacaatggttgcggaactggtggaaaccagccgtttgtgggggcgcatcgccgcgcgc
atcgatccggaatgggttgaaccagtagcgcagcacctgattaaacgttcgtacagtgaa
ccgcactgggagcgggcgcagggcgcggtaatggcaacggaaaaagtgacggtttatggt
ctgccaatcgttgcggcgcgcaaagtgaactacagccagatcgacccgatgctgtgtcgt
gagctctttattcgccacgcgctggtcgagggtgactggcaaacccggcatgctttcttt
cgcgacaacctgaaactgcgcgcggaagtggaagaactggagcacaaatcccgccgccgc
gacattctggtggacgacgaaacgctgtttgagttttatgaccagcgcatcagccacgag
gtgatttccgcccgccatttcgacagctggtggaaaaaggccagccgtgaagcccccgat
ctgctcaacttcgaaaagagcatgctgattaaagagggcgcagagggcgtcagtaagctc
gattaccccaacttctggcatcagggtaacctgaagctgcgtctgagttatcagtttgaa
ccgggcgcggatgcagacggcgtcacggtacatatcccgctgccgttattaaaccaggtc
gaagagagcgggtttgagtggcaaattcccggcctgcgccgcgaactggtgattgcgctg
atcaaatcactgccgaaaccgacgcggcgcaacttcgttcccgcgccaaactacgccgaa
gcgtttctgggacgcgttacaccgctggaactgccattgctggatgcgctggagcgcgag
ctgcgccggatgacgggggttaccgtcgaccgcgacgactggcactgggatcaggtgccc
gatcacctgaaaatcagcttccgcgtagtggatgacaagaacaagaagctgctggaaggg
cgctcgctggccgaactgaaagagcgcctgaaaggcaaagtgcaggaaactctttctgcg
gtggccgatgacggcattgagcagagcggtttgcatatctggagtttcggccagttgccg
gaaagctacgagcaaaaacgcggtaactacaaggtaaaagcctggcctgcgctggtcgat
gaacgtgacagtgtcgcgatcaagctgtttgataacccgcaggagcagcaacaggcgatg
tggcgcggtatccgccgcctgctgctgctaaatattccgtcgccgattaaatacctgcac
gagaaattgcccaacaaagccaagctggggctctatttcaacccgtacggcaaagtgctg
gatttgattgatgactgcatttcctgcggcgtggacaaactgattgatgacgcgggcggc
ccggtatggacggaagagagcttcgctgcgctgcatgaaaaagtgcgcgccgaactgaac
gaaacggtggtggagatcgccaaacaggtcgaacagatcctgacggcggtgttcaatatc
aacaagcggctgaaagggcgcgtggatatgaccatggcgctcgggctgtcggatatcaaa
acgcaaatgagcgggctggtgtatcgcgggtttgttaccggcaacggtttccgccgtctg
ggcgacacgttgcgttacctgcaagccatcgagaagcggctggaaaaactggccgtcgat
ccgcaccgcgaccgcgcgcagatgctgaaagtggagcagacacagcaagcctggcagcag
tggctgaataaactgccgccggcacgccgggaagatgaggatgtcaaagcgatccgctgg
atgatcgaagagctgcgcgtcagctactttgcgcagcaactggggacaccgtatcccatc
tccgataagcgtatcctgcaggcaatggagcagattagcgcctga
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