Enterobacter sp. R4-368: H650_05890
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Entry
H650_05890 CDS
T02700
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H650_05890 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enr03400
]
H650_05890 (sbcB)
Enzymes [BR:
enr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
H650_05890 (sbcB)
DNA repair and recombination proteins [BR:
enr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H650_05890 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H650_05890 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H650_05890 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGN84749
LinkDB
All DBs
Position
1085643..1087067
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AA seq
474 aa
AA seq
DB search
MSDSAATPTFLFHDYETFGTSPALDRPAQFAAIRTDADFNIIGEPEVFYCKPADDYLPQP
EAVLITGITPQIARAKGENEAAFAKRIHDLFTVPNTCVLGYNNVRFDDEVTRNIFYRNFY
DPYAWSWQNHNSRWDLLDVMRACYALRPDGINWPENEDGLPSFRLEHLTKANGIEHANAH
DAMADVYATIAMAQLVKAKQPKLFDYLFSHRHKQKLATLIDVPQMKPLVHVSGMFGAWRG
NTSWVAPLAWHPENRNAVIMVDLAGDMSPLLELDTDALRERLYTPKAELGDSAAVPVKLV
HLNKCPILAQANTLRPHDAERLGINRQQCLDNLQILRDNPQVREKVLAIFAEAEPFVPSE
NVDAQIYNGFFSDADRAAMKILLETEPRNLPALDITFADARIEKLLFNYRARNFPGTLDE
HEQQRWLTHRRNVFTPEFLQQYAETLQALFQQYEGDSEKQALLKALWQYAEEIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgattccgccgcaacgcccacttttctctttcacgattacgaaactttcggtacc
agcccggcgctggatcgtccggcgcagttcgccgcgattcgcaccgacgcggatttcaac
attattggcgagccggaagtcttctattgcaaaccggcggacgactatctgccgcagccg
gaagcggtgctgataaccggtatcaccccgcaaattgcccgcgctaaaggcgagaacgaa
gcggctttcgccaaacgtattcacgatctgttcaccgtgccgaacacttgtgtgctcggt
tacaacaatgtgcgttttgacgacgaagtgacgcgcaatattttctaccgcaacttctac
gatccttacgcctggagctggcaaaaccataattcacgctgggatttgctggacgttatg
cgcgcctgctacgccctgcgcccggacgggattaactggccggaaaatgaagacggtctg
cccagtttccgccttgagcacctgacaaaagccaacggcattgaacacgccaacgcccac
gatgcaatggcggatgtttacgccactatcgccatggcgcaactggtgaaagcgaagcag
ccgaagttgttcgactacctgttcagccatcgccataagcagaagctggcgacgctgatc
gatgtgccgcaaatgaaaccgctggtgcatgtctccgggatgtttggtgcctggcgcggt
aacaccagttgggtggcacctctggcctggcacccggaaaaccgcaacgcggtgattatg
gtggatctggcgggagacatgtcgccgctgctggaactggataccgatgcgctgcgcgaa
aggctgtatacaccgaaagcggaactcggcgatagcgcggcggtgcccgtgaaactggtg
catctgaataagtgcccgatcctggcgcaggccaatacgctgcgcccgcacgacgccgag
cggctgggcattaaccgccagcagtgcctggataatctgcaaattctgcgcgataacccc
caggtgcgcgagaaagtgctggcgattttcgccgaggcggaaccgtttgtcccttctgag
aacgtggacgcacaaatctacaacggctttttcagcgatgccgaccgcgctgcgatgaaa
attttgctggaaaccgagccgcgcaacctgcccgcgctggacatcacctttgccgatgcg
cgcattgaaaaactgctgtttaactaccgggcgcgtaacttccccggcacgctggatgag
cacgaacagcagcgctggcttacgcatcgccgcaatgtcttcactcccgagtttttgcag
caatacgccgaaacgctgcaggcgctgttccagcaatatgaaggcgatagtgaaaagcag
gcgctgttgaaagcgctgtggcagtacgccgaagagattgtctga
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