Enterobacter sp. R4-368: H650_11750
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Entry
H650_11750 CDS
T02700
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
enr
Enterobacter sp. R4-368
Pathway
enr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H650_11750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enr03021
]
H650_11750
Transcription machinery [BR:
enr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H650_11750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_SUN2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
AGN85816
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All DBs
Position
2326693..2328534
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AA seq
613 aa
AA seq
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MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEQARLSDLITGFVDPNAEEDMAPTA
THVGSELSSEEMDDDEDEEDEEDDDSDDDNSIDPELAREKFAELRTQYELTRDTIKAKGR
SHVAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMPKK
NFITLFTGNETNETWFNAALAMNKPWSEKLHEVAEEVQRSLMKLQQIEEETGLTIEQVKD
INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE
YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP
EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL
RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH
PSRSEVLRSFLDD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtcacccgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgatcag
atcgaagacatcatccaaatgatcaacgacatgggcatccaggtgatggaagaagcaccg
gacgccgatgatctgttgctggccgaaaactccaacaacactgacgaagatgcggaagaa
gccgccgcacaagtgctttccagcgttgaatctgaaatcgggcgaaccactgacccggtg
cgcatgtacatgcgcgaaatgggcaccgttgagctgctgacccgcgaaggcgaaatcgac
atcgctaaacgcatcgaagacggcatcaaccaggttcagtgttccgttgccgaatacccg
gaagcgatcacctatctgctggagcagtatgatcgcgttgaagctgaacaggctcgcctc
tcagatttgatcaccggctttgtcgatccaaacgctgaagaagacatggcgccaaccgcg
acccacgtcggttctgaactctccagcgaagagatggatgatgatgaagacgaagaagat
gaagaagacgacgacagcgatgatgacaacagcatcgatcctgaactggcgcgtgaaaaa
ttcgctgagctacgtacccagtacgaactgactcgcgacactatcaaagccaaaggacgc
agccacgttgccgcgcaggaagagatcctgaagctgtctgaagtgttcaaacagttccgt
ctggtgccaaaacagttcgattacctggtcaacagcatgcgagtcatgatggatcgcgta
cgtacccaggaacgcatcatcatgaaactgtgtgttgaacagtgcaaaatgccgaagaaa
aacttcattacactgttcaccggcaacgaaaccaacgaaacctggttcaacgctgcgctg
gccatgaacaaaccgtggtcggaaaaactgcatgaagtggcagaagaagttcaacgcagc
ctgatgaaactgcaacaaattgaagaagaaaccggcctgaccattgagcaggtaaaagac
atcaaccgtcgtatgtctatcggcgaagcgaaagcgcgtcgtgcgaagaaagagatggtg
gaagcgaacttgcgtctggttatttctatcgccaagaaatacaccaaccgcggtctgcag
ttcctcgatctgattcaggaaggcaacatcggtctgatgaaagcggttgataagttcgaa
taccgccgtggttacaaattctccacctacgcaacctggtggatccgtcaggcgatcacc
cgttccatcgcggatcaggcgcgcaccattcgtattccggtgcatatgattgagactatc
aacaagctcaaccgtatctcccgccagatgttgcaggaaatgggccgtgaacccacgccg
gaagagctggctgagcgtatgctgatgccggaagataagatccgtaaggtgctgaaaatc
gcgaaagagcctatctccatggaaacaccaatcggtgatgatgaagattcgcatctgggt
gatttcatcgaggataccaccctcgagctgccgctggactctgcaaccactgaaagtctg
cgcgccgcaacgcacgacgttctggctggcctgaccgcccgtgaagcgaaagttctgcgt
atgcgtttcggtatcgatatgaacaccgaccacacgctggaagaagtgggtaaacagttt
gacgtgacccgcgaacgtatccgtcagatcgaagcgaaagcgctgcgtaaactgcgtcat
ccgagccgttctgaagtgctgcgtagcttcctcgacgattaa
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