Enterobacter sp. R4-368: H650_12295
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Entry
H650_12295 CDS
T02700
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H650_12295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enr03019
]
H650_12295
03009 Ribosome biogenesis [BR:
enr03009
]
H650_12295
Enzymes [BR:
enr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H650_12295
Messenger RNA biogenesis [BR:
enr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H650_12295
Ribosome biogenesis [BR:
enr03009
]
Prokaryotic type
rRNA helicases
H650_12295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_C
CMS1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGN85893
LinkDB
All DBs
Position
complement(2424626..2426521)
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AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVSVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEEEMDI
ETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGERGGEDRPR
RERRDVGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKGM
PGEVLQHFTRTRILNKPMNMQLLGDAQPRERSERRGGGERRGGFGGERREGGRGEGRRFS
GERQEGRSFGGERRAPRRDRDDNAPRRRNDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcc
cttaacgatctcggttacgaaaaaccatctccgatccaggctgagtgcatcccgcacctg
ctgaacggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcgttt
tctctgccgctgctgaacaacatcgatccggacctgcgtgcgccgcagatccttgtgctc
gctccgacccgcgaactggcggttcaggttgctgaagcaatgaccgatttctctaaacat
atgcgcggtgtaagcgtggtagccctgtacggcggccagcgttatgacgtgcaattacgc
gctcttcgccaggggccacagatcgtcgtcggtacgccgggtcgtctgttggatcacctg
aaacgcggcacgctggatctctctaaactgagcggtctggtgctggatgaagccgacgaa
atgctgcgcatgggctttatcgaagacgtagaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgccaccatgccggaagcaatccgtcgcattactcgccgc
tttatgaaagagccgcaggaagtgcgcattcaatccagcgtgacgactcgtccggacatc
agccagagctactggactgcatacggcatgcgtaaaaacgaagcgctggttcgcttcctg
gaagcggaagattttgatgcggcgatcatcttcgttcgtaccaaaaacgcaacgctggaa
gtggctgaagcgctggaacgcagtggctataacagcgccgcactgaacggtgacatgaac
caggcactgcgtgagcagacgctggagcgtctgaaagacggtcgtctggatatcctgatc
gcaactgacgttgcagcacgtggtctggacgttgagcgcatcagcctggttgttaactac
gacatcccgatggattctgaatcctacgttcaccgtatcggtcgtaccggtcgtgcgggt
cgtgcgggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgtacgatgaaactgaccattccggaagtggaactgccgaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgctaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgcgcgctgctggcaaaaattcaaccttctgctgaagaagagatggatatt
gaaacgctggccgctgcactgctgaaaatggctcagggcgaacgtccgctgatcctcccg
ccggatgcaccgatgcgtcctaagcgtgagttccgcgatcgtgatgaccgtttcgaacgc
cgtggcgatcgtaacgatcgtggtccgcgtggcgaacgtggtggcgaagatcgtccgcgt
cgtgaacgtcgtgatgttggcgaaatggaactgtatcgtatcgaagtgggccgcgatgat
ggtgttgaagtacgccatatcgttggtgctatcgcgaacgaaggtgatatcagcagccgt
tacattggtaacatcaaactgtttggtactcactctaccattgagctgccgaaaggcatg
ccgggcgaagttctgcagcacttcactcgcacgcgtattctgaacaagccgatgaatatg
cagctgctgggcgatgcacagccgcgtgagcgtagcgaacgtcgtggtggcggtgagcgc
cgcggtggtttcggtggtgaacgccgtgaaggtggtcgtggtgaaggccgtcgtttcagc
ggtgagcgtcaggaaggtcgtagtttcggtggcgaacgtcgtgcaccgcgccgcgatcgc
gacgataacgctccgcgtcgccgtaacgacgcataa
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