Enterobacter sp. R4-368: H650_12305
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Entry
H650_12305 CDS
T02700
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H650_12305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enr03019
]
H650_12305
03016 Transfer RNA biogenesis [BR:
enr03016
]
H650_12305
Enzymes [BR:
enr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H650_12305
Messenger RNA biogenesis [BR:
enr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H650_12305
Transfer RNA biogenesis [BR:
enr03016
]
Prokaryotic type
tRNA degradation factors
H650_12305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
S1_RRP5
aRib
KH-I_KHDC4-BBP
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AGN85895
LinkDB
All DBs
Position
complement(2427694..2429829)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKASKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQIVIQNINELVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITAEIEVGRVYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQTQPVEASEAPQAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggtcaacataccgtcacgctggaaacc
ggcatgatggcgcgtcaggcgactgctgccgttatggtaagcatggatgacaccgcagta
ttcgtgaccgttgttggccagaaaaaagcaaaaccaggtcaggatttcttcccgctgacc
gttaactatcaagagcgtacgtacgctgcaggtaaaatccctggcggtttcttccgtcgt
gaaggccgtccgagcgaaggcgaaacgctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaagggttcgtgaacgaagtgcaggttatcgctactgtagtttccgtt
aacccgcaggttaacccggatatcgtagccatgatcggtgcttccgccgcgctttcactg
tctggtattccgttcaatggcccgattggcgctgcgcgtgttggttatatcaacgaccag
tacgttctgaacccaactcaggaagagctgaaagcaagtaagctggacctggtcgtagcc
ggtactgaagccgcggttctgatggttgaatctgaagcggaactgctgagcgaagatcag
atgctgggcgctgtggtgtttggccacgaccagcagcagattgttatccagaacatcaac
gagctggtaaaagaagcaggcaaaccgcgttgggactggcagccggaagcggtgaacgaa
gcgctgaacgcgcgcgttgctgcactggcagaatcacgtttgagcgatgcgtatcgcatc
actgacaaacaagagcgttatgctcaggttgacgtgatcaaatccgaaaccatcgcaacg
ctggtggcagaagatgaaaccctggatgccaatgagctgggtgaaatcctgcacgctatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgtatcgatggccgcgaa
aaagatatgatccgtggtctggacgttcgtaccggtgttctgcctcgcacccatggttcc
gcactgtttacccgcggcgaaactcaggcgctggttactgcaactctgggtaccgcacgt
gacgcgcagatcatcgacgagctgatgggcgagcgcactgactctttcctgttccattac
aacttccctccgtactccgtaggggaaaccgggatggttggttcgcctaaacgtcgtgaa
attggtcacggccgtctggctaaacgcggcgtgctggcagtaatgccggatgctgataaa
ttcccgtacaccgtacgtgtagtttctgaaatcaccgaatcgaacggctcttcttctatg
gcttccgtttgtggcgcatccttggcgctgatggacgcaggcgtaccggtgaaagccgcc
gttgcgggtatcgcaatgggcctggtgaaagaaggcgacaactttgttgttctgtccgac
atcctgggcgacgaagatcacctgggcgatatggacttcaaagtagcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgttgaaccaggcgaaaggtgctcgtctgcatattctgggtgtaatggagcaggcg
attaacgcgccgcgtggtgatatctctgaatttgcgccgcgtatccataccatcaaaatt
aatccagataagatcaaagacgttatcggtaaaggcggctccgtcattcgtgcgctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgatggtaccgtgaaaatcgcagctact
gacggcgacaaagcgaaacatgctattcgccgtattgaagagatcacggctgagatcgaa
gtgggccgtgtctatagcggtaaagtgacccgcatcgttgactttggcgcgtttgttgcc
atcggcggcggtaaagaaggtctggttcatatttctcagatcgcggacaaacgtgttgag
aaagtgaccgattatctgcagatgggccaggaagtgccggttaaagttctggaagttgac
cgtcagggccgtattcgtctgagcattaaagaagcgactgagcagactcagcctgtagaa
gcgtcggaagcgccgcaagcagagcagggcgagtaa
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