Enterobacter sp. R4-368: H650_16060
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Entry
H650_16060 CDS
T02700
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H650_16060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enr03019
]
H650_16060
Enzymes [BR:
enr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H650_16060
Messenger RNA biogenesis [BR:
enr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H650_16060
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
AGN86579
LinkDB
All DBs
Position
complement(3181448..3182716)
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AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIEDRKVNQPRAIIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRMIDYTKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPVTSRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
DEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGSLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYDPDALLTELPPPKRLTRSRSGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaagtg
atcgaagcccttgaaaaaaaagggtttcataattgcacgcctattcaggccctggctctt
ccgctgacgctggcgggccgtgatgttgcaggtcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatcttctctctcacccggcaatcgaagaccgt
aaagtgaaccagccgcgcgcaattattatggcgccgacacgtgaactggcggtacaaatt
cacgccgatgcagaaccgctggcgcaggcgactggcctgaagctgggtctggcttacggc
ggtgacggctacgacaaacagctgaaagtgctggaaagcggcgtcgatattttaatcggc
accacgggccgaatgatcgattacaccaaacagaaccatattaacctgggcgcgatccag
gtcgtggtgctggacgaagcagatcgtatgtacgatctgggctttatcaaagatattcgc
tggttgttccgccgcatgccacccgtgacttcacgtttgaacatgctcttctccgccacg
ctgtcctaccgggtgcgcgagctggcatttgagcagatgaataacgctgaatacgtcgaa
gtagagccggaacaaaaaacgggccaccgcattaaagaagagcttttctacccgtccaac
gacgagaaaatgcgtctgctgcaaacgttgatcgaagaagagtggccggatcgcgccatt
atcttcgctaataccaaacaccgctgtgaagatatctggggcagcctggccgcagatggt
catcgtgttggtttgctcaccggtgatgtggcgcagaaaaaacgcctgcgtattctcgac
gaattcacgcgtggcgatctcgacattctggtggcgactgacgttgccgcacgtggtctg
catattcctgcggtcacgcacgtttttaactatgacctgccggatgattgtgaagattac
gttcaccgtatcggtcgtaccggtcgcgctggcgccagcggtcactcaatcagcctcgcc
tgtgaagagtacgcattgaacctgccggcgattgagacctatatcgggcactcgattccg
gtcagcaaatacgatccggatgccctgctcaccgagctgccgccgccaaaacgcctgacg
cgctcacgctctggcaacggcccgcgccgcagcggtggcgctccacgtaatcgtcgtcgt
tcaggttaa
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