Enterobacter sp. R4-368: H650_16240
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Entry
H650_16240 CDS
T02700
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H650_16240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enr03019
]
H650_16240
03400 DNA repair and recombination proteins [BR:
enr03400
]
H650_16240
Enzymes [BR:
enr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H650_16240
Messenger RNA biogenesis [BR:
enr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H650_16240
DNA repair and recombination proteins [BR:
enr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H650_16240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGN86611
LinkDB
All DBs
Position
3216555..3218381
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AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQQDIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALVLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQFEVINGCRNGQIRLLY
IAPERLMLDNFLDQLRQWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQMLPSVPFMAL
TATADDTTRRDIERLLGLHDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKCGI
VYCNSRAKVEDTAARLQSRGFSAAAYHAGLENEVRARVQEQFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPRQYDGLQDAQKAL
SAIYRVNQRFGMGYVVEVLRGANNQRIREFGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
FATQNIAQHSALQLTEAARSLLRGEVPLMLAVPRMVALKPKVMQKAAVGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLSVNGVGTRKLERFGQEFMALIR
AHVDGEEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattgaatcaggaatcgctggcgaaacaggttttgcaagagacc
ttcggctaccagcaattccgcccgggccagcaggatattatcgacaccgtgctcagcggc
cgcgactgcctggtggtgatgccgaccggcggcgggaaatccctgtgttaccaaattccg
gcgctggtattagatggcctgacggtggtggtttcaccgcttatctcgctgatgaaagat
caggtcgatcagctactggcaaacggtgttgcagcagcatgcctgaactctacccagagc
cgcgaacagcagtttgaggtgatcaacggctgtcgcaacggccagattcgcctgctttat
atcgctcccgagcgcctgatgctcgacaacttcctcgatcagctgcgccagtggaatccg
gtgctgctggccgtggacgaagcgcactgtatttcccagtggggccatgatttccgcccg
gaatacgccgcgctgggccagttacgccagatgctgccttccgtgccgtttatggcgctt
accgccaccgccgatgacacaacccgccgcgatatcgagcgtttgctggggcttcacgat
ccgctgattcaggtcagcagctttgaccgcccgaacattcgctacatgctgatggaaaaa
tttaagccgctcgatcagctactgcgttatgtgcaggagcagcgcggcaagtgcggcatc
gtgtattgcaacagccgggcgaaagtggaagacaccgccgcccgtttgcaaagccgtggt
tttagcgcggcggcttaccatgccgggctggaaaacgaggtgcgggcgcgcgtacaggaa
cagttccagcgcgacgacctgcaaattgtcgtggcgacggtggcgtttggtatgggcatc
aataagcccaacgtgcgcttcgtggtgcatttcgacattccgcgcaatatcgaatcctat
tatcaggaaaccggtcgcgccgggcgtgacggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgcctggaagagaagcccgccgggccgttg
caggatatcgaacgacacaagctcaatgcgatgggcgcctttgccgaagcgcaaacctgc
cgccgtctggtgctgctgaactactttggcgaaggtcgccaggagccctgcggtaactgc
gatatttgcctcgatccgccgcgccagtacgacggattgcaggacgcgcaaaaagcgctg
tcggctatttaccgcgtgaatcagcgtttcggtatgggctatgtggtggaagtgctgcgc
ggggcgaacaatcagcgcatccgcgagtttggtcacgacaaattaccggtgtatggaatt
ggtcgcgagcagagccacgaacattgggtgagcgtgatccgccaactgattcacttaggc
ttcgccacacaaaacattgctcagcactcggcattgcaactcaccgaagcggcgcgttcg
ctgctgcgcggtgaagtcccgttgatgctggcggtgccgcgtatggtggcgctgaaacca
aaagtgatgcagaaagcggcggttggcaattacgaccgcaagctgttcgccaagctgcgc
aagttgcgtaaagcgattgccgatgaagagaacattccgccgtacgtggtctttaacgac
gccacactgattgaaatggccgaacagatgccgctctctcccggtgagatgctcagcgtc
aacggggtggggacgcgcaaacttgaacgcttcggccaggagttcatggcgttgattcgc
gcgcatgttgacggcgaagaagagtag
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