Enterobacter sp. R4-368: H650_22695
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Entry
H650_22695 CDS
T02700
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H650_22695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enr03019
]
H650_22695
Enzymes [BR:
enr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H650_22695
Messenger RNA biogenesis [BR:
enr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H650_22695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
PCF11_RFEG_rpt
P-loop_SecA
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AGN87827
LinkDB
All DBs
Position
4593751..4595226
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AA seq
491 aa
AA seq
DB search
MSFDALGLNPEILRAVAEQGYLQPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIQNEPHAKGRRPIRALILTPTRELAAQVGENVQEYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDEIKQLAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIALAGYEPDPSIKAEPIQNGRGQGGGRQGSGRGQGGGGRGQSAPRRSEGE
GQKPRSPRRAEGGAAKQEGGRRAEGGAKPAGGRRLDGGAAKPAGGRRLDGGAAPAGNPSR
RRRPRKPSAAE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatgcccttggcctgaacccggaaatcctgcgcgctgttgccgagcagggt
tatcttcagccgacccctattcagcagcaggctatcccggcggtgctgcaaggccgcgat
ctgatggcgagcgcccagaccggcaccggtaaaactgccggttttacgctgccgctgttg
caacgcctgattcaaaacgagccgcacgccaaaggccgtcgcccgatccgggcgctgatc
ttaacgccaacccgtgaactggcggcgcaggtgggtgaaaacgttcaggagtacagcaaa
tacctgaatatccgctcgctggtggtattcggcggcgtgagcattaacccgcagatgatg
aagctgcgcggcggcgttgacatcctggtggcgacaccggggcgcctgctggatctggaa
caccagaacgcgctgaaactcgatagcgtggaaattctggtgctcgacgaagccgaccgc
atgctggatatgggctttattcacgatattcgccgcgtgctggcaaaactgccgccgaag
cgtcagaacctgctgttctccgcgaccttctctgatgagatcaaacagctggcggaaaag
ctgctgcgtaatccactggaaatcgaagtggcgcgccgcaacaccgcttctgagcaggtg
acgcagcatgtgcatttcgtcgataaaaaacgcaaacgggaactgctgtcgcagatgatt
ggcgagggcaactggcagcaggtgctggtcttcacccgcacgaaacacggcgctaaccac
ctggcagagcagcttaataaagacggcatcaccagcgcggcgatccacggcaataagagc
cagggggcgcgtacgcgtgcgctggcggatttcaaatctggcgacattcgtgtactggtg
gcgaccgacatcgcggcgcgtgggctcgacattgaagagttgccgcatgtggtgaactac
gaactgccgaacgtgccggaagattacgtgcaccgtattggccgtaccggccgggcagcg
gcgaccggcgaagcgctgtcgctggtatgcgtggacgaacataaattgctgcgcgatatc
gaacgcctgctgaaaaaagagatcccgcgcattgcgctggcaggctatgagccggatccg
tcgatcaaagccgagccgattcagaatggtcgcggccagggcggcggtcgtcagggcagt
ggacgcgggcagggcggcggtggccgtggtcagtctgcgccgcgccgcagtgaaggcgaa
ggacaaaaacctcgctccccgcgccgcgccgaaggtggcgctgcgaagcaggagggggga
cgccgtgctgaaggcggtgcgaagccggccggtggtcgtcgtctggatggcggagccgct
aaaccggcaggtggacgccgtcttgatggcggtgcggcgccggcgggcaacccgtctcgc
cgtcgtcgcccgcgtaagccttctgccgccgagtaa
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