Enterobacter sp. DSM 30060: HWQ15_09135
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Entry
HWQ15_09135 CDS
T07983
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ens
Enterobacter sp. DSM 30060
Pathway
ens03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ens00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWQ15_09135 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ens03019
]
HWQ15_09135 (rhlB)
Enzymes [BR:
ens01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWQ15_09135 (rhlB)
Messenger RNA biogenesis [BR:
ens03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWQ15_09135 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLA02249
LinkDB
All DBs
Position
complement(1916975..1918243)
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALETKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPDALMSELPPPKRLTRPRTGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaggtg
atcgaagcccttgaaactaaagggtttcataactgcacgcccattcaggctctcgccctg
ccgctgacgctggccggtcgtgatgttgcagggcaggcgcaaaccggtactggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccagcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggccccgacgcgagaactggcggtacagatc
cacgcagacgctgagcccctggcgcaagccactggcctgaaacttggcctggcctatggc
ggcgacggctacgataaacagctgaaagtgctggaaagcggcgtggatatcctgattggg
accacaggccgtcttatcgactacgctaaacagaaccatatcaacctcggcgcaatccag
gtcgtggtgctggatgaagcagaccgcatgtacgatctgggcttcattaaagacatccgc
tggctgttccgccgtatgcctgcggcaaaccagcgtctgaacatgctgttctccgcaacc
ctgtcataccgcgtacgtgaactcgcattcgagcagatgaacaatgcggaatatgtggaa
gtagaaccggagcagaaaaccgggcaccgcattaaagaagagctcttctatccttctaat
gaagagaaaatgcgcctgctgcaaaccctgatcgaagaagagtggccggatcgcgcgatc
atctttgcgaacactaaacaccgctgtgaagatatttggggccacctggcggcagatggt
caccgtgtgggcctgctgaccggcgacgtggcgcagaaaaaacgcctgcgcattctcgac
gaatttactcgtggcgaccttgatattctggtcgcgaccgacgtggcggcccgtggcctg
cacattccagccgtgacgcacgtctttaactatgacctgccagatgactgtgaagactat
gtacaccgtatcggtcgtaccggtcgtgccggcgcaagcggtcactccatcagccttgca
tgtgaagagtatgcgctgaaccttccggccattgagacctatatcggtcactctattcca
cagagtaaatacaatccggacgcgctgatgagcgaactgccgccacctaagcgccttacc
cgtccacgtaccggtaatggcccgcgtcgttccggcggtgcgccgcgtaatcgtcgtcgt
tcaggttaa
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