Enterobacter sp. DSM 30060: HWQ15_20795
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Entry
HWQ15_20795 CDS
T07983
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ens
Enterobacter sp. DSM 30060
Brite
KEGG Orthology (KO) [BR:
ens00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ens03016
]
HWQ15_20795
Enzymes [BR:
ens01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HWQ15_20795
Transfer RNA biogenesis [BR:
ens03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HWQ15_20795
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
QLA04365
LinkDB
All DBs
Position
4354339..4356273
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFVEGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPDGVAT
KMQDEGLERRDLTALDFVTIDSASTEDMDDALYAEEAADGKMHLTVAIADPTAWIVEGSK
LDEMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRPHEVRPVLACRMTIAADGTIEEDIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDNIAAQIRLLHRVCQSRSEWRQTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESVARPQDETTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVNIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactacattcccagacgccc
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggctttcttgaagttgacgga
cagaagagctacttcattccgcctcctcagatgaagaaagtgatgcatggcgaccgcatt
tcggccgttattcataccgaaaaggaacgagagtctgccgagccggaagcactgatcgaa
cctttcctgacccgctttgtcgggaaagtgcataaaaaagacgatcgtctttctatcgta
ccggatcatcctctcctgaaagatgccatcccttgccgcgctgcgcgtggcgttgagcat
gactttgtcgagggtgactgggcggttgccgaaatgcgccgtcatcctttaaaaggcgat
cgcggtttctacgccgagctgacccagttcatcacctttggcgacgaccatttcgtccca
tggtgggtgacgctggcgcgccacaacctcgaaaaagaagcgccggatggcgtagcgacc
aaaatgcaggacgaaggtcttgagcgtcgcgatctgacagcgctggactttgtcaccatc
gacagcgccagcaccgaggatatggacgatgcgctgtatgccgaagaggcagcggatggc
aaaatgcatctgaccgtcgccatcgccgaccctaccgcatggattgtcgaaggcagcaag
ctggacgaaatggccaaagtgcgttcgttcaccaactacctgccgggcttcaacatcccg
atgctgccgcgcgagctttccgacgatctctgctccctgcgtccccatgaagtgcgtccg
gtactggcctgccgcatgaccatcgcggctgacggtaccattgaagaagatatcgaattc
ttcgccgccactatcgaatccaaagctaaactggcttatgacaacgtgtccgactggctg
gaaaataccggcagctggaagcctgaatccgataatatcgctgcgcaaattcgtctgctg
catcgcgtctgccagagccgcagtgagtggcgccagacccacgcgctggtatttaaggac
cgcccggactaccgctttgtgctgggggaaaaaggcgaagtgctcaatatcgtcgccgag
ccacgccgtattgccaaccgtatcgttgaagaagcgatgatctccgccaacatttgcgcc
gcacgcgtgctgcgcgacaagttaggctttggcatttacaacgtgcacaccggctttgac
ccggctaacaccgaagcgctggccgccctgctcaaaacccatgacgtccacgtcgatccg
gaagaggtgctgaccctgccaggcttctgcaagctgcgccgcgagctggacgcacagccg
tcaggtttccttgacagccgcattcgccgcttccagtcctttgcggaaatcagcacggag
ccaggcccgcacttcggtctcggtcttgaggcttacgccacctggacctccccgatccgt
aagtacggcgacatggttaaccatcgtctgctgaaagcgatcatcaaaggggaatctgtt
gcccgcccacaggatgagactacgttgcagatggcagagcgtcgccgtctgaaccgtatg
gcggagcgtgatgtcggcgactggttgtacgcgcgtttcctgaatgataaggcagggact
gacacccgtttcccggctgaaatcattgacatcagccgcggcggtatgcgcgtgcgtctg
gtggataatggcgccgttgcctttattcctgccccgttcctgcatgccgttcgcgacgaa
ctggtttgtagccaggaaaacgggaccgtgcaaattaaaggcgaaacggtttacaaagtc
actgacgtgattgatgtaaacatcgctgaagtccgcatggaaacccgcagcattatcgcg
cgccctgtcgcctga
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